Table 1. Clinical isolates and reference strains used in the phylogenetic analysis of HAdV-4 strains recovered from cases of acute respiratory infection detected in northeastern United States, 2011–2015*.
| Virus name | Place and year of isolation | Genome type | GenBank accession no. |
|---|---|---|---|
| Isolates from this study | |||
| TB071911 | Yale, CT, 2011 | 4a2 | KY996453 |
| 12-12752 (NY7) | NY, 2012 | 4a2 | KY996450 |
| 12-27440 (NY8) | NY, 2012 | 4a1 | KY996451 |
| 13-5497 (NY11) | NY, 2013 | 4a SmaI v | KY996449 |
| 14-4876 (NY16) | NY, 2014 | 4a2 | KY996448 |
| 14-9111 (NY17) | NY, 2014 | 4a1 | KY996442 |
| 14-33430 (NY20) | NY, 2014 | 4a1 | KY996445 |
| 14-38662 (NY21) | NY, 2014 | 4a1 | KY996443 |
| 14-38813 (NY22) | NY, 2014 | 4a1 | KY996444 |
| 15-418 (NY23) | NY, 2015 | 4a1 | MF002042 |
| 15-3477 (NY24) | NY, 2015 | 4a SmaI/XhoI v | KY996446 |
| 15-4054 (NY25) |
NY, 2015 |
4p |
KY996447 |
| Reference strains | |||
| RI-67 | Fort Leonard Wood, MO, 1952 | 4p | AY594253 |
| CL68578† | Camp Lejeune, NC, 1965 | 4p | AY487947 |
| RU-2533 | Cape May, NJ, 1966 | 4p | MF002043 |
| NHRC90339 | Cape May, NJ, 2001 | 4p4 | EF371058 |
| NHRC42606 | Fort Jackson, SC, 2002 | 4a2 | AY599835 |
| NHRC3 | Brooks Air Force Base, TX, 2003 | 4a1 | AY599837 |
*HAdV-4, human adenovirus type 4; NHRC, Naval Health Research Center; v, variant. †Vaccine strain.