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. Author manuscript; available in PMC: 2018 Jan 26.
Published in final edited form as: Arch Virol. 2009 Mar 14;154(4):677–681. doi: 10.1007/s00705-009-0353-5

Table 2.

Amino acid differences between the proteins of swine and chicken strains.

HA classification A/Indonesia/6/05-like HA classification Clade 2.1.3


Virus Ck
UT6016
Sw
UT6003
Virus Ck
UT6044
Sw
UT6005
Sw
UT6010


MLD50 (log10EID50)a 3.8 >6.1 MLD50 (log10EID50) 2.2 >6.1 3.5
Protein position Protein position
PB2 526 R K PB2 13c Q H Q
PA 231 T A 150d G V G
618 A T 184 T A A
684 G E 317 L M M
HA1b 36 A T 365 I M M
133 A S 678 G D D
NP 50 S N PB1-F2 4 G E E
318 S P 47 S N N
NA 266 S G PA 367 R K K
NS1 27 M L 397 K E E
74 G D 547 D N N
180 F L HA1 156 A T T
NA 17 I V V
41 G R G
197 K R R
M2 23 S N N
29 A V V
68 V I I
NS1 124 K I I
212 N S S
NS2 60 I V V
92 N N T
a

The same data as shown in Table 1.

b

H5 numbering

c

Gln at 13 position of the PB2 protein is widely conserved among H1N1, H3N2, and H5N1 viruses.

d

Gly-to-Val substitution at 150 position of the PB2 protein is a novel mutation among H1N1, H3N2 and H5N1 viruses.