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. Author manuscript; available in PMC: 2018 Jan 26.
Published in final edited form as: Proceedings (IEEE Int Conf Bioinformatics Biomed). 2017 Dec 18;2017:1262–1269. doi: 10.1109/BIBM.2017.8217840

Table I.

Erroneous ST Assignments for Top-Level STs

ST Extent # of concepts SPC LCA SI MC # of errors % of errors (95% CI)
Conceptual Entity 676 50 22 0 7 8 37 74 (61.8 – 86.2)
Chemical 27 27 12 0 2 5 19 70.4 (53.2 – 87.6)
Group 53 53 11 0 0 24 35 66 (53.2 – 78.8)
Anatomical Structure 127 127 13 0 49 7 69 54.3 (45.6 – 63.0)
Biologic Function 1398 50 1 0 17 9 27 54 (40.2 – 67.8)
Event 151 151 72 1 0 2 75 49.7 (41.7 – 57.7)
Activity 366 50 6 0 1 16 23 46 (32.2 – 59.8)
Entity 24 24 5 3 2 0 10 41.7 (22.0 – 61.4)
Phenomenon or Process 1596 50 3 0 16 1 20 40 (26.4 – 53.6)
Physical Object 47 47 4 0 1 8 13 27.7 (14.3 – 39.9)
Total 4465 629 149 4 95 80 328 52.1 (48.1 -55.9)
% of all errors 45.4% 1.2% 29% 24.4%

ST: Semantic type

SPC: more specific ST classification needed

LCA: Lowest common ancestor

SI: semantic inversion

MC: Miscategorization

CI: Confidence interval