Table 1.
Primer (5'-3') F/R | Fragment Size (bp) | Anneling Temperature (°C) | Cycles | |
---|---|---|---|---|
110 | 55 (40 sec) | 35 | ||
miR-9-1 | tataagggtttcgtttcgtttttaac (M) | |||
acccgtcaccgaaaaaaa (M) | ||||
110 | 60 (40 sec) | 35 | ||
ggttttgttttgtttttaatgt (U) | ||||
caaccaaaaccctaccttcaac (U) | ||||
116 | 58 (1 min) | 35 | ||
miR-9-3 | attggtcgatttttggattgac (M) | |||
cgcttaaaaaacctcgaacg (M) | ||||
116 | 55 (1 min) | 35 | ||
gattggttgatttttggattgat (U) | ||||
caaaacacttaaaaaacctcaaaca (U) | ||||
180 | 58 (40 sec) | 40 | ||
MTHFR | tagatttaggtaggtgaagtagggtagac(M) | |||
gaaaaactaataaaaaacggacgaa(M) | ||||
180 | 58 (40 sec) | 40 | ||
tttaggtatgtgaaatagggtagatgt (U) | ||||
caaaaaactaataaaaaaccaacaaa (U) |
* F-Forward, R-Reverse, M-methylated, U-unmethylated, MSP- Methylation Specific PCR.