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. Author manuscript; available in PMC: 2018 Jun 18.
Published in final edited form as: Nat Immunol. 2017 Dec 18;19(2):130–140. doi: 10.1038/s41590-017-0013-y

Figure 2. KEAP1 binds PGAM5, which is required to induce ROS-dependent cell death.

Figure 2

(a) Identification of KEAP1 binding partners. SII-Affinty purification (AP) of SII-HA-tagged KEAP1 and THYN1 as control (ctrl) followed by LC-MS/MS analysis. Volcano plots show the average degree of enrichment of label-free quantitation (LFQ) values by KEAP1 over control (x-axis) and transformed p-values (two-tailed t-test; y‐axis) for each identified protein. The hyperbolic curve separates significantly enriched proteins (FDR < 0.00001, S0=100) background. Red: KEAP1, brown: known KEAP1 interactors (based on Biogrid), green dot: protein associated with cell death. Four independent APs were performed for each bait. (b) Immunoblot of precipitates after AP with SII-HA-KEAP1 or SII-HA-THYN1 (ctrl). (c) SII-HA-KEAP1 expressing HeLa Flp-In cells were treated with the indicated amounts of H2O2 for 8h followed by SII-AP and Immunoblotting. (d) Flow cytometry analysis for viability of HeLa cells transfected with the indicated siRNAs for 48h, followed by treatment with 0.5 mM of H2O2 for the indicated time. (e) HeLa cells were treated with the indicated siRNAs for 48h and stimulated with H2O2 for 20h. The graph shows mean resazurin conversion activity ± S.D. of six measurements. Knockdown efficiency was confirmed by Immunoblotting against indicated proteins 48h after siRNA transfection (right panel). (f) as (e) but stimulation with H2O2, 20 µM CCCP, 20 µM Sorafenib (Sora), 20 µM Z-VAD + 20 µM TNF and 1 µM STS,, respectively. (g) as (e) but MEFs with indicated genotype were stimulated as indicated. (h) Light microscopic images of Pgam5+/+ and Pgam5/ MEFs after 20h treatment with 1 mM H2O2. Scalebar: 100 µM. (e)-(g) ** p-value < 0.001, * p-value < 0.05, ns: non-significant, 2way ANOVA. One representative experiment of three (b)-(f) (h), four (g) or six (e) is shown.