Table 1. Performance comparison of STARS with respect to ClustalW and UCLUST on sets of different sizes of COXI sequences.
Number of sequences | STARS K = 6 (s) | STARS K = 17 (s) | STARS K = 35 (s) | ClustalW (s) | UCLUST (s) / No. of resulting clusters |
---|---|---|---|---|---|
8 | 0.034 | – | – | 2.8 | 1 / 8 |
17 | 0.038 | 0.071 | – | 9.85 | 1 / 17 |
35 | 0.071 | 0.098 | 0.167 | 32.68 | 1 / 35 |
70 | 0.160 | 0.188 | 0.279 | 130.91 | 1 / 70 |
141 | 0.383 | 0.655 | 0.770 | 485.02 | 1 / 138 |