Table 2. Performance comparison of STARS with respect to UCLUST on sets of different sequences.
Dataset | Number of sequences | Average sequence length | Number of clusters | Sequence to PSD transform (s) | STARS (s) | UCLUST (s) |
---|---|---|---|---|---|---|
A | 31 | 16,695 | 6 | 1.92 | 0.70 | 1 |
B | 38 | 1,407 | 4 | 0.27 | 0.03 | 1 |
C | 116 | 7,154 | 17 | 3.05 | 1.69 | 1 |
D | 34 | 27,567 | 12 | 3.38 | 1.23 | 12 |
E | 30 | 3,361,393 | 8 | 392.98 | 281.70 | – |