Table 5.
Genes underlying QTLs associated with flowering time
| QTL | LG | Position | Nearest gene | In.Out | DistToStart |
|---|---|---|---|---|---|
| FT01.98 | 1 | 98,035,404 | HanXRQChr01g0016411 | Upstream | −11,986 |
| FT02.78 | 2 | 78,884,560 | HanXRQChr02g0042521 | Downstream | 295,211 |
| FT04.74 | 4 | 74,011,326 | HanXRQChr04g0107731 | Upstream | −93,659 |
| FT04.144 | 4 | 144,357,532 | HanXRQChr04g0118011 | Downstream | 129,288 |
| FT05.208 | 5 | 208,225,977 | HanXRQChr05g0160261 | In | 81 |
| FT07.34 | 7 | 34,580,910 | HanXRQChr07g0191191 | Upstream | −651 |
| FT09.199 | 9 | 199,047,452 | HanXRQChr09g0272971 | In | 18,574 |
| 9 | 199,047,477 | HanXRQChr09g0272971 | In | 18,599 | |
| 9 | 199,047,735 | HanXRQChr09g0272971 | In | 18,857 | |
| 9 | 199,071,389 | HanXRQChr09g0272971 | In | 42,511 | |
| 9 | 199,109,369 | HanXRQChr09g0272981 | In | 5822 | |
| FT11.47 | 11 | 47,260,646 | HanXRQChr11g0330951 | Upstream | −81,868 |
| 11 | 47,535,132 | HanXRQChr11g0330981 | Upstream | −82,521 | |
| FT13.190 | 13 | 190,953,163 | HanXRQChr13g0424551 | In | 3214 |
| FT15.102 | 15 | 102,863,872 | HanXRQChr15g0487841 | Upstream | −44,505 |
| FT16.167 | 16 | 167,723,083 | HanXRQChr16g0528041 | In | 31,859 |
| FT11.47 | 17 | 175,837,528 | HanXRQChr17g0564111 | Upstream | −5234 |
| FT17.13 | 17 | 13,852,550 | HanXRQChr17g0537591 | In | 4839 |
| FT17.184 | 17 | 184,825,665 | HanXRQChr17g0565411 | Upstream | −13,145 |
One SNP per QTL was selected, and its redundancy, if applicable, was also analyzed. The table describes QTL name (QTL), chromosome (LG), position (Position), closest gene, location with respect to the closest gene (In.Out), and distance to the start of the closest gene (DistToStart)