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. Author manuscript; available in PMC: 2018 Jan 28.
Published in final edited form as: Pac Symp Biocomput. 2017;22:254–265. doi: 10.1142/9789813207813_0025

Table 2.

Mean AUC scores on the TFBS classification task

Model Mean AUC Median AUC STDEV
MEME-ChIP [16] 0.834 0.868 0.127
DeepBind [2] (CNN) 0.903 0.931 0.091
Small RNN 0.860 0.881 106
Med RNN 0.876 0.905 0.116
Large RNN 0.808 0.860 0.175
Small CNN 0.896 0.918 0.098
Med CNN 0.902 0.922 0.085
Large CNN 0.880 0.890 0.093
Small CNN-RNN 0.917 0.943 0.079
Med CNN-RNN 0.925 0.947 0.073
Large CNN-RNN 0.918 0.944 0.081