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. 2018 Jan 24;5:3. doi: 10.3389/fmolb.2018.00003

Table 2.

Results gathered on pLG72 by employing deletion variants.

Variant Region Method Properties References
Kd, hDAAO (μM) Tm (°C) Residual hDAAO activitya (%) Comments
Wild-type (1–153) graphic file with name fmolb-05-00003-i0001.jpg RE 2.66 59.2 16 Mitochondrial; binds hDAAO with no change in kinetic parameters Sacchi et al., 2008; Birolo et al., 2016
1–64 graphic file with name fmolb-05-00003-i0002.jpg RE 2.2 73.7 72 Compared to the wild-type, the theoretical buried solvent accessible area following hDAAO binding is halved Birolo et al., 2016
1–94 graphic file with name fmolb-05-00003-i0003.jpg 2.1 50.9 62
1–123 graphic file with name fmolb-05-00003-i0004.jpg 0.4 66.3 47
72–153 graphic file with name fmolb-05-00003-i0005.jpg 3.7 64.6 50
122–153 graphic file with name fmolb-05-00003-i0006.jpg PS 110 Unspecific binding
26–153 graphic file with name fmolb-05-00003-i0007.jpg RC Partial loss of mitochondrial localization Kvajo et al., 2008
36–153 graphic file with name fmolb-05-00003-i0008.jpg Partial loss of mitochondrial localization
51–153 graphic file with name fmolb-05-00003-i0009.jpg
1–110 graphic file with name fmolb-05-00003-i0010.jpg Low expression yield (probably because of protein instability)
1–120 graphic file with name fmolb-05-00003-i0011.jpg
1–20 graphic file with name fmolb-05-00003-i0012.jpg Y2 No interaction with hDAAO Chang et al., 2014
1–35 graphic file with name fmolb-05-00003-i0013.jpg
1–60 graphic file with name fmolb-05-00003-i0014.jpg
1–122 graphic file with name fmolb-05-00003-i0015.jpg
1–137 graphic file with name fmolb-05-00003-i0016.jpg
95–153 graphic file with name fmolb-05-00003-i0017.jpg Interacts with hDAAO
123–153 graphic file with name fmolb-05-00003-i0018.jpg Interacts with hDAAO; 1.4-fold more efficient in hDAAO coimmunoprecipitation than wild-type; increases hDAAO activity (20–30%)b
138–153 graphic file with name fmolb-05-00003-i0019.jpg Interacts with hDAAO; 2.2-fold more efficient in hDAAO coimmunoprecipitation than wild-type; increases hDAAO activity
1–71 graphic file with name fmolb-05-00003-i0020.jpg MM Similar to membrane bound proteins (e.g., membrane transporters or O-GlcNAc transferase) Kato and Fukui, 2017
72–153 graphic file with name fmolb-05-00003-i0021.jpg Similar to adaptor proteins (type I DNA methyl transferase, RH bundle subdomain of G protein-coupled receptor kinase)

RE, characterization of pure recombinant protein expressed in E. coli; RC, overproduction in COS-7 cells; Y2, yeast two-hybrid system; PS, peptide synthesis; MM, molecular modeling.

a

At 1:2 hDAAO:pLG72 ratio and 30 min of incubation.

b

3.5-fold increase in hDAAO activity with wild-type pLG72.