Table 1. Sequences of primers and probes used in this study.
Purpose | Target gene | Primer or probe name | Sequence (5’→3’) | Amplicon size (base pairs) |
---|---|---|---|---|
HRSV Generic screening | M protein | RSV-Forward | GCAAATATGGAAACATACGTGAACA | 116 |
RSV-Reverse | GCACCCATATTGTWAGTGATGCA | |||
RSV-P | (FAM)-CTTCACgAAggCTCCACATACACAgCWg-(Eclipse) | |||
HRSV-A subtyping | F protein | RSV-A-Forward | ATCAGAAAAAGTTAATGTCCA | 118 |
RSV-A-Reverse | ACACCATATAGTGGTAATTGT | |||
RSV-A-P | (FAM)-TCAAATAgTTAgACAgCAAAgTTACTCT-(BHQ1) | |||
HRSV-B subtyping | F protein | RSV-B-Forward | GTTTAACAAGGACTGATAGAG | 153 |
RSV-B-Reverse | TGTTACAAAGGCTGACTT | |||
RSV-B-P | (FAM)-ACTGATCCTGCATTATCACARTACCA-(BHQ1) | |||
HRSV-A genotyping | G protein | GPA_RSV | GAAGTGTTCAACTTTGTACC | 487 |
F1 | GGCAAATAACAATGGAGTTG | |||
HRSV-B genotyping | G protein | GPB_RSV | AAGATGATTACCATTTTGAAGT | 507 |
F1 | GGCAAATAACAATGGAGTTG |