Table 1.
Genetic parameters of the PAX7 10-bp indel polymorphism in five cattle breeds.
| Breeds | Sex | Genotypic frequency | Allelic frequency | He | Ne | PIC | HWE (P)1 | |||
|---|---|---|---|---|---|---|---|---|---|---|
| Ins-Ins | Ins-Del | Del-Del | Ins | Del | ||||||
| NY (220) | Female | 0.245 | 0.505 | 0.250 | 0.498 | 0.502 | 0.500 | 2.000 | 0.375 | > 0.05a |
| JX (395) | Female | 0.400 | 0.215 | 0.385 | 0.508 | 0.492 | 0.500 | 2.000 | 0.375 | < 0.01 |
| QC (224) | Female | 0.513 | 0.254 | 0.232 | 0.641 | 0.359 | 0.460 | 1.853 | 0.354 | < 0.01 |
| LX (161) | Female | 0.317 | 0.385 | 0.298 | 0.509 | 0.491 | 0.500 | 1.999 | 0.375 | < 0.01 |
| CY (233) | Female | 0.468 | 0.129 | 0.403 | 0.532 | 0.468 | 0.498 | 1.992 | 0.374 | < 0.01 |
1P-value with “a” indicates that the breed was in Hardy-Weinberg equilibrium (HWE). He, heterozygosity. Ne, effective allele numbers. PIC, polymorphism information content.