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. 2018 Jan 30;92(4):e01416-17. doi: 10.1128/JVI.01416-17

TABLE 1.

Sequences and chemical properties of the NAPs used in this studya

NAP Sequence Length (nt) PS 2′OMe 5-MeC
REP 2006 dN40 40 +
REP 2031 dC40 40 +
REP 2181 (dAdC)50 100 +
REP 2180 (dAdC)40 80 +
REP 2149 (dAdC)30 60 +
REP 2055 (dAdC)20 40 +
REP 2150 (dAdC)15 30 +
REP 2151 (dAdC)10 20 +
REP 2152 (dAdC)5 10 +
REP 2107 N40 40 + +
REP 2138 C40 40 +
REP 2139 (AC)20 40 + + +
REP 2165 (AC)20 40 + +b +
REP 2147 (AC)20 40 + +
REP 2172 (AC)20 40 +
a

Abbreviations: d, DNA; N, degenerate sequence; PS, phosphorothioation of phosphodiester linkage (increases amphipathicity); 2′OMe, O-linked methylation at the 2′ position in ribose (increased stability and reduced Toll-like receptor [TLR] reactivity); 5-MeC, methylation at the 5′ position in cytidine base (reduced TLR reactivity).

b

Positions 11, 21, and 31 have 2′OH ribose.