TABLE 2.
Prevalence of PA-343A/S and PA-347D/E
| Host and subtype | No. of isolates analyzed | Prevalence (%) of the indicated amino acid at the following position in PA protein: |
|||
|---|---|---|---|---|---|
| 343 |
347 |
||||
| A | S | D | E | ||
| Human isolates | |||||
| Seasonal H1N1 | 1,650 | 20.1a | 0.2 | 99.5 | 0.06 |
| H1N1pdm | 7,578 | 93.2 | 0.05 | 99.9 | 0.01 |
| H2N2 | 105 | 100 | 0 | 100 | 0 |
| H2N2 | 9,714 | 7.4 | 92.6 | 99.9 | 0.04 |
| Swine isolates | |||||
| H1 | 3,293 | 95.1 | 0.9 | 95.7 | 3.6 |
| H3 | 1,577 | 94.0 | 2.3 | 94.9 | 3.2 |
| Other | 88 | 94.3 | 1.1 | 100 | 0 |
| Equine isolates | |||||
| H3N8 | 128 | 60.1b | 0 | 99.2 | 0 |
| H7N7 | 12 | 58.3 | 41.7 | 100 | 0 |
| Avian isolates | |||||
| H1 | 822 | 99.4 | 0 | 100 | 0 |
| H2 | 527 | 99.8 | 0 | 100 | 0 |
| H3 | 2,140 | 99.2 | 0.8 | 99.95 | 0 |
| H4 | 1,962 | 98.1 | 0.3 | 99.8 | 0 |
| H5c | 3,972 | 89.0 | 8.4d | 99.7 | 0.2 |
| H6 | 1,622 | 94.3 | 0.7 | 99.9 | 0.06 |
| H7e | 2,165 | 96.9 | 2.9f | 99.9 | 0 |
| H8 | 170 | 100 | 0 | 100 | 0 |
| H9 | 2,164 | 89.7 | 9.1g | 99.8 | 0.05 |
| H10 | 1,099 | 87.2 | 12.6h | 99.8 | 0.09 |
| H11 | 653 | 99.4 | 0.3 | 100 | 0 |
| H12 | 231 | 87.0 | 1.3 | 100 | 0 |
| H13 | 395 | 94.7 | 5.3 | 100 | 0 |
| H14 | 32 | 100 | 0 | 100 | 0 |
| H15 | 17 | 100 | 0 | 100 | 0 |
| H16 | 229 | 100 | 0 | 100 | 0 |
| Avian and human H5 | 3,972 | 89.0 | 8.4d | 99.7 | 0.2 |
| Avian H5 | 3,717 | 89.0 | 8.6i | 99.7 | 0.2 |
| Human H5 | 255 | 88.6 | 5.5j | 100 | 0 |
| Avian and human H7N9 | 616 | 90.3 | 9.3 | 99.8 | 0 |
| Avian H7N9 | 518 | 89.8 | 10.0 | 99.8 | 0 |
| Human H7N9 | 98 | 92.9 | 5.1 | 100 | 0 |
79.6% of seasonal human H1N1 viruses encode E at this position.
39.8% of equine H3N8 viruses encode E at this position.
Avian and human isolates.
Until 2010, 0.04%; since 2011, 21.5% (mostly from Vietnam and Cambodia).
Avian H7 viruses only; for human H7N9 viruses, see below.
Until 2013, 0.2%; since 2014, 10.4% (almost all are H7N9 viruses).
Until 2012, 1.5%; since 2013, 26.7% (mostly H9N2 viruses from China).
Until 2012, 0.3%; since 2013, 40.5%.
Until 2010, 0.04%; since 2011, 23.1%.
Until 2010, 0%; since 2011, 43.8% (all are H5N1 viruses obtained from Cambodia in 2013).