Table 1.
Regional population | No. P. falciparum Isolates | Nucleotide diversity | Hd (SD) | No. P. vivax isolates | Nucleotide diversity | Hd (SD)b | ||
---|---|---|---|---|---|---|---|---|
πa (SD)b | θsc (SD)b | πa (SD)b | θsc (SD)b | |||||
AFRe | 629 | 0.00026 (0.00001) | 0.00486 (0.00094) | 0.775 (0.014) | 90 | 0.00043 (0.00005) | 0.00254 (0.00068) | 0.7930 (0.047) |
CAMf | 8 | 0.00035 (0.00007) | 0.00027 (0.00017) | 0.857 (0.108) | 68 | 0.00008 (0.00002) | 0.00040 (0.00015) | 0.3510 (0.076) |
EASg | — | — | — | — | 125 | 0.00082 (0.00005) | 0.00121 (0.00034) | 0.9170 (0.015) |
MCAh | — | — | — | — | 30 | 0.00060 (0.00008) | 0.00126 (0.00044) | 0.9490 (0.023) |
MELi | 308 | 0.00028 (0.00002) | 0.00113 (0.00028) | 0.740 (0.019) | 128 | 0.00045 (0.00005) | 0.00178 (0.00047) | 0.8669 (0.023) |
SAMj | 237 | 0.00018 (0.00002) | 0.00160 (0.00039) | 0.551(0.039) | 238 | 0.00058 (0.00030) | 0.00330 (0.00075) | 0.9291 (0.012) |
SEAk | 532 | 0.00028 (0.00001) | 0.00139 (0.00031) | 0.773 (0.015) | 160 | 0.00087 (0.00003) | 0.00280 (0.00068) | 0.9700 (0.006) |
SOAl | 81 | 0.00036 (0.00004) | 0.00094 (0.00029) | 0.858 (0.027) | 102 | 0.00055 (0.00005) | 0.00255 (0.00067) | 0.9440 (0.018) |
Total | 1795 | 0.00036 (0.00002) | 0.00708 (0.00118) | 0.887 (0.0047) | 941 | 0.00085 (0.00002) | 0.00807 (0.00014) | 0.9732 (0.0027) |
aπ = average number of pairwise nucleotide differences per site; bSD = standard deviation; cθS = standardized number of segregating sites; dH = haplotype diversity; eAFR = Africa; fCAM = Central America; gEAS = East Asia (only P. vivax); hMCA = Middle East and Central Asia (only P. vivax); iMEL = Melanesia; jSAM = South America; kSEA = Southeast Asia; and lSOA = South Asia.