Table 3.

Details of number of mapped SNPs, map length and SNPs densities of individual chromosomes, seven homoeologous groups and three genomes (A, B and R genomes).

Genome and Chromosome	No. of SNPs (from R genome)	No. of Unique Loci (from R Genome)	Map Length (cM)	Marker Density		Map Density
				SNPs/cM	Unique Loci/cM	cM/SNP	cM/Unique Locus
A          1	238 (0)	14 (0)	63.09	3.77	0.22	0.27	4.51
2	362 (4)	46 (4)	172.09	2.10	0.26	0.48	3.74
3	152 (1)	34 (1)	195.65	0.78	0.17	1.29	5.75
4	195 (2)	31 (2)	149.44	1.30	0.21	0.77	4.82
5	272 (0)	42 (0)	136.00	2.00	0.31	0.50	3.24
6	10 (0)	5 (0)	17.76	0.56	0.28	1.78	3.55
7	792 (2)	52 (2)	206.14	3.84	0.25	0.26	3.96
Total	2021 (9)	224 (9)	940.17	2.15	0.24	0.47	4.20
%	38.30 (0.17)	37.77 (1.52)
B          1	955 (4)	36 (4)	75.40	12.67	0.48	0.08	2.09
2	274 (1)	27 (1)	141.59	1.94	0.19	0.52	5.24
3	225 (0)	28 (0)	135.99	1.65	0.20	0.60	4.86
4	94 (1)	20 (1)	77.58	1.21	0.26	0.83	3.88
5	479 (3)	31 (2)	137.16	3.49	0.23	0.29	4.42
6	97 (0)	22 (0)	143.39	0.68	0.15	1.48	6.52
7	125 (0)	16 (0)	49.36	2.53	0.32	0.39	3.09
Total	2249 (9)	180 (8)	760.48	2.96	0.24	0.34	4.22
%	42.60 (0.17)	30.35 (1.35)
R          1	33 (13)	11 (6)	83.62	0.39	0.13	2.53	7.60
2	21 (0)	2 (0)	7.59	2.77	0.26	0.36	3.80
3	45 (13)	11 (5)	109.46	0.41	0.10	2.43	9.95
4	405 (290)	69 (42)	197.97	2.05	0.34	0.49	2.87
5	215 (147)	46 (37)	219.79	0.98	0.21	1.02	4.78
6	260 (79)	46 (31)	192.04	1.35	0.24	0.74	4.17
7	25 (25)	4 (4)	10.99	2.27	0.36	0.44	2.75
Total	1004 (567)	189 (125)	821.47	1.22	0.23	0.82	4.35
%	19.04 (10.80)	31.87 (20.08)
A+B+R   1	1226 (17)	61 (10)	222.10	5.52	0.27	0.18	3.64
2	657 (5)	75 (5)	321.26	2.05	0.23	0.49	4.28
3	422 (14)	73 (6)	441.11	0.96	0.16	1.05	6.04
4	694 (293)	120 (45)	425.00	1.63	0.28	0.61	3.54
5	966 (150)	119 (39)	492.96	1.96	0.24	0.51	4.14
6	367 (79)	73 (31)	353.20	1.04	0.21	0.96	4.84
7	942 (27)	72 (6)	266.50	3.53	0.27	0.28	3.70
Total	5274 (585)	593 (142)	2522.13	2.09	0.23	0.48	4.25
%	100.00 (11.10)	100.00 (23.95)