Table 6.
Summary of main effect QTL for ERG, PHT, LDG, GPC, TWT and YLD identified during the present study.
| Trait | QTL Name | Chr. | Flanking Markers | Interval | Position | LOD | %R2 | Add Effect | A*E | D | Other Associated Traits |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Ergot | QErg.lrdc-4A | 4A | ISOTIG23128-TDURUM_CONTIG41185_259 | 10.8–24.3 | 20.3 | 2.5 | 11.0 | 8.9 | 6.2 | U | YLD |
| QErg.lrdc-5R | 5R | ISOTIG30930-ISOTIG29158 | 138.7–147.4 | 143.1 | 2.6 | 12.0 | −6.4 | −3.9 | T | GPC | |
| QErg.lrdc-7A | 7A | EXCALIBUR_C30713_591-WSNP_EX_C5177_9174930 | 132.5–142.5 | 136.3 | 8.1 | 34.0 | 34.0 | 5.6 | U | - | |
| GPC | QGpc.lrdc-2A | 2A | BS00022241_51-BS00081194_51 | 89.7–91.9 | 90.8 | 9.8 | 39.0 | −0.3 | - | U | - |
| QGpc.lrdc-2B | 2B | BOBWHITE_C2988_2161-BS00022572_51 | 106.5–138.6 | 127.8 | 2.5 | 6.1 | 0.1 | 0.1 | T | DI, DS, VRI | |
| QGpc.lrdc-4R ❀ | 4R | C11841_198-C1659_1301 | 35.0–43.9 | 39.8 | 8.9 | 36.0 | −0.7 | −0.3 | U | YLD | |
| QGpc.lrdc-5R | 5R | ISOTIG30930-ISOTIG29158 | 132.9–145.0 | 141.1 | 9.0 | 37.0 | −0.1 | −0.2 | U | ERG | |
| QGpc.lrdc-6R | 6R | TDURUM_CONTIG41906_1479-WSNP_EX_C7002_12063380 | 17.6–20.0 | 19.9 | 3.0 | 17.8 | −0.5 | - | U | PHT, LDG, YLD | |
| QGpc.lrdc-7B | 7B | EXCALIBUR_C3489_182-BOBWHITE_C20735_255 | 0.0–5.1 | 0.0 | 6.0 | 26.0 | −0.2 | −0.2 | U | - | |
| TWT | QTwt.lrdc.1R | 1R | RAC875_REP_C116934_270-ISOTIG11711 | 69.4–78.6 | 69.5 | 3.1 | 15.0 | 0.5 | - | T | - |
| QTwt.lrdc.4R ❀ | 4R | BOBWHITE_C25209_235-ISOTIG19779 | 147.7–156.6 | 152.1 | 4.5 | 21.0 | 0.6 | - | T | VRI, DON, LDG | |
| QTwt.lrdc-5A.1 | 5A | EXCALIBUR_C34451_370-KUKRI_C9358_269 | 2.0–7.4 | 3.4 | 4.7 | 21.5 | −0.6 | −0.9 | U | - | |
| QTwt.lrdc-5A.2 | 5A | RAC875_C60453_122-WSNP_EX_C31154_39982416 | 100.2–109.2 | 101.4 | 5.3 | 23.0 | 0.7 | - | T | VRI | |
| QTwt.lrdc-5R | 5R | TDURUM_CONTIG50875_569-GENE-3619_813 | 23.4–77.1 | 50.1 | 2.5 | 12.0 | 0.6 | - | T | DI, DS, VRI | |
| YLD | QYld.lrdc-4A | 4A | ISOTIG23128-TDURUM_CONTIG41185_259 | 16.4–22.3 | 20.3 | 2.9 | 14.1 | −342.0 | −128.1 | U | ERG |
| QYld.lrdc-4R.2 ❀ | 4R | C1659_1301-GENE-1569_376 | 39.8–45.4 | 41.9 | 3.1 | 15.0 | −97.6 | −203.3 | U | GPC | |
| QYld.lrdc-6A | 6A | BS00110902_51-KUKRI_C20401_505 | 7.2–17.3 | 11.8 | 2.7 | 13.0 | −358.4 | - | U | - | |
| QYld.lrdc-6R | 6R | TDURUM_CONTIG41906_1479-WSNP_EX_C7002_12063380 | 16.2–19.9 | 17.6 | 2.5 | 12.0 | −371.0 | −251.1 | U | GPC, PHT, LDG | |
| PHT | QPht.lrdc-5A | 5A | CAP8_C317_307-GENE-2725_244 | 109.3–112.7 | 112.4 | 2.7 | 13.0 | −1.9 | 2.2 | T | DON |
| QPht.lrdc-5R | 5R | TPLB0059H22_1233-CONTIG2043 | 108.7–117.9 | 116.9 | 2.7 | 13.0 | −2.4 | −2.3 | T | DS, VRI, DON | |
| QPht.lrdc-6R | 6R | KUKRI_C9940_659-TDURUM_CONTIG41906_1479 | 2.1–27.1 | 16.3 | 9.4 | 38.0 | −3.2 | - | T | GPC, LDG, YLD | |
| QPht.lrdc-7R | 7R | ISOTIG32436-ISOTIG07139 | 0.0–8.7 | 1.0 | 2.5 | 11.0 | −1.0 | −1.7 | T | LDG | |
| LDG | QLdg.lrdc-2R | 2R | EXCALIBUR_C46590_290-BS00061187_51 | 1.0–7.0 | 7.0 | 2.5 | 11.7 | −0.1 | −0.1 | T | - |
| QLdg.lrdc-4R.1 | 4R | ISOTIG25347-ISOTIG22327 | 89.8–101.2 | 97.2 | 6.0 | 26.0 | 0.3 | 0.1 | U | DON | |
| QLdg.lrdc-4R.2 | 4R | ISOTIG17427-ISOTIG19779 | 153.3–161.7 | 156.4 | 5.9 | 26.0 | 0.1 | 0.1 | U | VRI, DON, TWT | |
| QLdg.lrdc-6R ❀ | 6R | TDURUM_CONTIG8849_343-ISOTIG24496 | 8.2–9.9 | 9.8 | 2.9 | 14.1 | −0.14 | −0.1 | T | GPC, PHT, YLD | |
| QLdg.lrdc-7B | 7B | WSNP_KU_C10355_17149304-IBV7925 | 38.5–48.5 | 44.5 | 2.5 | 6.0 | −0.1 | −0.1 | T | - | |
| QLdg.lrdc-7R | 7R | C10245_171-C6434_652 | 0.0–10.8 | 8.8 | 3.0 | 14.1 | −0.2 | - | T | PHT |
Note: ❀ QTL located in interchanged fragment; D: donor; T: TMP16315; U: AC Ultima.