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. 2018 Jan 27;10(2):410–426. doi: 10.1093/gbe/evy003

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© The Author(s) 2018. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Fig. 3. — —Identified miRNAs in A.viridis with similarity to known miRNAs. (A) A typical prediction result from miRDeep2 software tool showing the miRNA precursor, mature and star sequence and their abundances in the sample. Shown is avi-miR-temp-100 precursor with top sequence alignments in the sample for each strand. (B) Alignments of novel miRNAs from A. viridis to known miRNAs from other species. Sequences of our predicted miRNAs from A. viridis (denoted as avi-miR-temp) were aligned to known miRNA sequences from H. sapiens (hsa-miR), N. vectensis (nve-miR), H. magnipapillata (hma-miR), S. pistillata (spi-miR), and A. digitifera (adi-miR). (temp = temporary; miRNAs that are not yet registered in the miRBase).