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A) Recombination pattern (according to jpHMM) of the two URF_50B (accession numbers MF109354 and MF109527) discovered in the ICONIC dataset and the GenBank full-length sequence JN417236, prototype of the recombinant CRF50_A1D. B) Bootscanning analysis of the URF_50B performed using SimPlot and diagram showing the definitive recombination pattern.
