Table 1. Details of the 46 RABV isolates sequenced in this study.
Genbank Accession numbers |
Lab ID | Country of origin |
Year of isolation | Species | Taxonomic name |
Genome size |
---|---|---|---|---|---|---|
LT909545 | 20282 | Afghanistan | 2006 | dog | Canis lupus familiaris | 11,929 |
LT909542 | 13125 | Algeria | 1984 | dog | Canis lupus familiaris | 11,931 |
LT909535 | 13123 | Algeria | 1989 | dog | Canis lupus familiaris | 11,928 |
LT909530 | 13251 | Chile | 1979 | human | 11,931 | |
LT909534 | 13465 | Kenya | 1997 | jackal | n.d. | 11,923 |
LT909536 | 13471 | Kenya | 2001 | dog | Canis lupus familiaris | 11,923 |
LT909546 | 13135 | Nigeria | 1988 | cat | Felis silvestris catus | 11,927 |
LT909548 | 13138 | Nigeria | 1989 | dog | Canis lupus familiaris | 11,923 |
LT909541 | 13086 | Pakistan | 1984 | dog | Canis lupus familiaris | 11,928 |
LT909531 | 13177 | Sudan | 1993 | dog | Canis lupus familiaris | 11,930 |
LT909528 | 20520 | Tanzania | 2009 | jackal | n.d. | 11,923 |
LT909551 | 13473 | Ethiopia | 1992 | dog | Canis lupus familiaris | 11,927 |
LT909547 | 13284 | Germany | 1990 | fox | Vulpes vulpes | 11,923 |
LT909537 | 12951 | Estonia | 2000 | fox | Vulpes vulpes | 11,923 |
LT909543 | 13249 | Chile | 1973 | human | Canis lupus familiaris | 11,925 |
LT909538 | 12989 | Finland | 1990 | fox | Vulpes vulpes | 11,923 |
LT909539 | 13182 | India | 2002 | dog | Canis lupus familiaris | 11,929 |
LT909527 | 13102 | Indonesia | 1988 | dog | Canis lupus familiaris | 11,930 |
LT909526 | 13162 | Iran | 1991 | fox | Vulpes vulpes | 11,924 |
LT909550 | 13020 | Norway | 2000 | fox | Vulpes lagopus | 11,927 |
LT909532 | 12929 | Poland | 1994 | fox | Vulpes vulpes | 11,924 |
LT909533 | 13044 | Saudi Arabia | 1990 | fox | Vulpes vulpes arabica | 11,924 |
LT909540 | 13043 | Saudi Arabia | 1987 | fox | Vulpes vulpes arabica | 11,924 |
LT909529 | 13122 | Algeria | 1984 | dog | Canis lupus familiaris | 11,928 |
LT909544 | 13212 | Mexico | 2002 | dog | Canis lupus familiaris | 11,925 |
LT909549 | 34873 | Thailand | 1988 | unknown | 11,930 | |
MG458304 | RV50 | United States | 1975 | bat | n.d. | 11,922 |
MG458305 | RV108 | Chile | unknown | bat | Desmodus rotundus | 11,923 |
MG458306 | RV860 | Czech Republic | unknown | fox | Vulpes vulpes | 11,924 |
MG458307 | RV995 | South Africa | 2000 | cat | Felis silvestris catus | 11,922 |
MG458308 | RV1009 | South Africa | 2000 | mongoose | n.d. | 11,926 |
KY860584 | RV1124 | Turkey | 1999 | dog | Canis lupus familiaris | 11,923 |
MG458309 | RV1185 | Serbia | 1978 | dog | Canis lupus familiaris | 11,923 |
MG458310 | RV1189 | Serbia | 1986 | fox | Vulpes vulpes | 11,923 |
MG458311 | RV1196 | Serbia | 1998 | fox | Vulpes vulpes | 11,923 |
MG458312 | RV1219 | Serbia | 1997 | fox | Vulpes vulpes | 11,923 |
MG458313 | RV1336 | Russia | 1996 | dog | Canis lupus familiaris | 11,926 |
MG458314 | RV1789 | British West Indies | 1997 | bat | Desmodus rotundus | 11,922 |
MG458315 | RV2321 | Egypt | 1998 | dog | Canis lupus familiaris | 11,923 |
MG458316 | RV2322 | Egypt | 1998 | dog | Canis lupus familiaris | 11,923 |
MG458317 | RV2323 | Egypt | 1999 | dog | Canis lupus familiaris | 11,923 |
MG458318 | RV2481 | South Africa | 2008 | human | 11,918 | |
MG458319 | RV2854 | Grenada | 2011 | mongoose | Herpestes auropunctatus | 11,925 |
MG458320 | RV2924 | Nepal | 2012 | human | 11,927 | |
KP723638 | RV2985 | Ethiopia | 2014 | wolf | Canis simensis | 11,926 |
MG458321 | ChDg (RABV) |
China | unknown | dog | Canis lupus familiaris | 11,924 |
n.d. = not determined. Information on the exact species was not available as at least two different species of jackals, mongoose, and bats are occurring in those particular countries.