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. 2018 Jan 18;9(1):e132. doi: 10.1038/ctg.2017.58

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Copyright © 2018 The Author(s)

Clinical and Translational Gastroenterology is an open-access journal published by Nature Publishing Group. This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/

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Microbiome dysbiosis in IBD. (a). Prevalence of microbial species per cohort. Each dot represents a microbial species. Prevalence is estimated as the number of individuals with the corresponding species. Abundance is defined as the total length of mapped reads divided by the reference genome length. (b). Microbial diversity per super kingdom in UC and CD patients and healthy controls is shown using Shannon diversity index.