Table 2. List of differentially expressed proteins in the DENV2-infected HepG2 cell with YK51 treatment.
SSpot # | Protein name (Gene symbols) | Swiss-Prot accession | Log normalized volume ± SDa | Fold changeb | Student’s t-test | Distinct sum MS/MS scorec | % Seq/ Matched peptidesd | MW (kDa)/pIe | |
---|---|---|---|---|---|---|---|---|---|
Infected, Untreated (n = 5) | Infected, Treated (n = 5) | ||||||||
1 | Retinal dehydrogenase 1 (AL1A1) | P00352 | 6.64 ± 0.26 | 6.32 ± 0.20 | −2.1 | 0.02 | 58.92 | 9/5 | 54.9/6.3 |
2 | Retinal dehydrogenase 1 (AL1A1) | P00352 | 6.98 ± 0.18 | 6.63 ± 0.29 | −2.1 | 0.01 | 328.30 | 39/20 | 54.9/6.3 |
3 | Interleukin enhancer-binding factor 2 (ILF2) | Q12905 | 7.15 ± 0.18 | 6.79 ± 0.37 | −2.0 | 0.03 | 134.79 | 27/10 | 44.7/5.2 |
4 | Eukaryotic initiation factor 4A-I (eIF4A-1) | P60842 | 6.57 ± 0.16 | 6.25 ± 0.24 | −2.0 | 0.01 | 291.69 | 45/19 | 46.2/5.3 |
5 | Proliferation-associated protein 2G4 (PA2G4) | Q9UQ80 | 6.60 ± 0.19 | 6.26 ± 0.31 | −2.0 | 0.02 | 77.32 | 13/4 | 43.8/6.1 |
6 | Inosinicase (PUR9) | P31939 | 6.73 ± 0.13 | 6.43 ± 0.19 | −2.0 | 0.01 | 359.25 | 28/24 | 64.6/6.27 |
7 | Alanine aminotransferase 2 (ALAT2) | Q8TD30 | 6.97 ± 0.15 | 6.66 ± 0.25 | −1.9 | 0.01 | 143.27 | 19/11 | 57.9/7.9 |
8 | ATP synthase subunit beta (ATPB) | P06576 | 6.53 ± 0.14 | 6.29 ± 0.11 | −1.8 | 0.00 | 23.53 | 6/2 | 56.9/5.4 |
9 | leucineaminopeptidase 3 (AMPL) | P28838 | 6.54 ± 0.16 | 6.25 ± 0.32 | −1.8 | 0.04 | 138.69 | 26/11 | 56.2/8.0 |
10 | 26S protease regulatory subunit 8 (PRS8) | P62195 | 6.78 ± 0.22 | 6.53 ± 0.17 | −1.8 | 0.03 | 55.22 | 13/5 | 45.6/7.11 |
11 | Glucose-6-phosphate 1-dehydrogenase (G6PDH) | P11413 | 6.91 ± 0.14 | 6.62 ± 0.25 | −1.8 | 0.02 | 141.97 | 18/11 | 62.5/8.23 |
12 | Protein disulfide-isomerase A6 (PDIA6) | Q15084 | 7.48 ± 0.17 | 7.21 ± 0.17 | −1.8 | 0.01 | 281.29 | 33/18 | 53.9/5.17 |
13 | Elongation factor 2 (EF-2) | P13639 | 6.54 ± 0.01 | 6.28 ± 0.21 | −1.8 | 0.01 | 227 | 19/17 | 95.3/6.41 |
14 | Protein disulfide-isomerase A3 (PDIA3) | P30101 | 7.32 ± 0.15 | 7.10 ± 0.20 | −1.7 | 0.03 | 314.27 | 40/21 | 56.8/5.99 |
15 | ATP synthase subunit beta (ATPB) | P06576 | 7.26 ± 0.17 | 7.04 ± 0.18 | −1.7 | 0.03 | 270.75 | 41/15 | 56.6/5.26 |
16 | Tubulin alpha-1B chain (TBA1B) | P68363 | 7.28 ± 0.17 | 7.03 ± 0.27 | −1.7 | 0.04 | 415.15 | 55/23 | 50.2/4.94 |
17 | T-complex protein 1 subunit alpha (TCP1A) | P17987 | 6.59 ± 0.01 | 6.33 ± 0.21 | −1.7 | 0.01 | 66.01 | 8/4 | 60.3/5.8 |
18 | Elongation factor Tu(EF-Tu) | P49411 | 7.06 ± 0.17 | 6.82 ± 0.24 | −1.7 | 0.04 | 356.83 | 48/21 | 49.9/7.26 |
19 | Protein disulfide-isomerase A6 (PDIA6) | Q15084 | 6.83 ± 0.12 | 6.62 ± 0.01 | −1.7 | 0.00 | 28.31 | 7/2 | 48.1/4.95 |
20 | Glutamate dehydrogenase 1 (GDH 1) | P00367 | 7.24 ± 0.14 | 7.01 ± 0.17 | −1.5 | 0.05 | 200.33 | 31/12 | 61.4/7.66 |
21 | Annexin A5 (ANXA5) | P08758 | 7.22 ± 0.01 | 7.03 ± 0.17 | −1.5 | 0.02 | 224.97 | 39/14 | 35.9/4.94 |
22 | Heat shock 70 kDa protein 9 (HSPA9) | P38646 | 7.23 ± 0.01 | 7.04 ± 0.20 | −1.5 | 0.03 | 197.84 | 24/21 | 73.9/6.04 |
23 | 26S proteasome non-ATPase regulatory subunit 7 (PSMD7) | P51665 | 6.87 ± 0.01 | 6.70 ± 0.01 | −1.5 | 0.00 | 59.57 | 19/5 | 37.0/6.29 |
24 | Transaldolase, 1 (TALDO1) | P37837 | 7.09 ± 0.10 | 6.90 ± 0.19 | −1.5 | 0.03 | 25.11 | 5/2 | 37.5/6.36 |
25 | Proteasome activator complex subunit 1 (PSME1) | Q06323 | 7.30 ± 0.15 | 7.12 ± 0.12 | −1.5 | 0.02 | 20.02 | 9/2 | 28.7/5.78 |
26 | ATP-citrate synthase, isoform X1 (ACL) | P53396 | 6.50 ± 0.12 | 6.33 ± 0.13 | −1.5 | 0.02 | 133.61 | 8/9 | 12.6/8.40 |
27 | biliverdin IX alpha reductase (BVR A) | P53004 | 7.36 ± 0.01 | 7.19 ± 0.12 | −1.5 | 0.01 | 39.14 | 9/3 | 33.5/5.91 |
28 | Electron-transfer-flavoprotein, beta polypeptide (EFTB) | P38117 | 7.30 ± 0.13 | 7.13 ± 0.10 | −1.5 | 0.01 | 50.81 | 14/4 | 27.9/8.55 |
29 | Actin-related protein 2/3 complex subunit 4 (p20-ARC) | P59998 | 7.12 ± 0.12 | 6.94 ± 0.12 | −1.5 | 0.01 | 49.75 | 22/4 | 19.7/8.54 |
30 | Mitogen-activated protein kinase 1 (MAPK 1) | P28482 | 7.07 ± 0.12 | 6.87 ± 0.19 | −1.5 | 0.03 | 62.04 | 16/4 | 41.4/6.5 |
Notes.
Logarithm of normalized spot volume with standard deviation.
Negative sign (−) of fold change signifies decreased abundance of identified proteins compared to DENV2-infected HepG2 without YK51 treatment.
Sum of the z-scores from each distinct detected peptide in a same protein species.
Percentage of protein sequence coverage (% Seq) and number of distinct detected peptides.
Molecular weight of protein in kilo Dalton and isoelectric focusing point of a protein.