Table 5.
The 11 target miRNAs of ROR and their binding sites
miRNA name | Align score | Energy | miRNA start | miRNA end | ROR start | ROR end |
---|---|---|---|---|---|---|
has-miR-29b-2-5p | 147 | −16.17 | 2 | 21 | 630 | 655 |
has-miR-129-5p | 146 | −15.05 | 2 | 19 | 1,650 | 1,670 |
has-miR-148a-3p | 160 | −15.42 | 2 | 21 | 2,507 | 2,526 |
has-miR-30c-2-3p | 156 | −16.07 | 2 | 19 | 1,767 | 1,792 |
has-miR-30c-2-3p | 153 | −15.67 | 2 | 19 | 1,138 | 1,160 |
has-miR-30c-2-3p | 142 | −15.85 | 2 | 21 | 1,952 | 1,975 |
has-miR-204-5p | 141 | −16.09 | 2 | 10 | 539 | 560 |
has-miR-153-3p | 141 | −15.03 | 2 | 10 | 1,496 | 1,517 |
has-miR-125a-5p | 165 | −24.98 | 2 | 23 | 928 | 952 |
has-miR-29c-3p | 147 | −15.74 | 3 | 21 | 419 | 441 |
has-miR-29c-3p | 144 | −14.31 | 3 | 17 | 2,529 | 2,550 |
has-miR-378a-5p | 150 | −18.41 | 2 | 21 | 1,689 | 1,712 |
has-miR-20b-5p | 143 | −16.96 | 3 | 22 | 1,321 | 1,342 |
has-miR-145-5p | 134 | −25.71 | 2 | 20 | 1,307 | 1,330 |
has-miR-145-5p | 133 | −18.48 | 3 | 21 | 805 | 828 |
has-miR-145-5p | 128 | −19.96 | 2 | 21 | 2,037 | 2,059 |
has-miR-145-5p | 127 | −11.07 | 2 | 20 | 1,291 | 1,310 |
has-miR-145-5p | 120 | −11.35 | 2 | 8 | 207 | 229 |
has-miR-145-5p | 120 | −13.08 | 2 | 8 | 679 | 701 |
has-miR-145-5p | 120 | −17.6 | 2 | 21 | 1,144 | 1,166 |
hsa-miR-145-5p | 119 | −18.87 | 4 | 22 | 774 | 798 |
hsa-miR-145-5p | 118 | −10.76 | 2 | 11 | 2,282 | 2,304 |
hsa-miR-145-5p | 118 | −9.54 | 2 | 11 | 2,294 | 2,316 |
hsa-miR-145-5p | 117 | −16.64 | 2 | 15 | 1,521 | 1,546 |
hsa-miR-145-5p | 110 | −18.93 | 3 | 22 | 2,012 | 2,032 |
hsa-miR-145-5p | 110 | −13.77 | 4 | 20 | 2,427 | 2,450 |
hsa-miR-145-5p | 108 | −16.94 | 2 | 13 | 1,406 | 1,428 |
hsa-miR-145-5p | 105 | −14.76 | 3 | 22 | 1,553 | 1,575 |
hsa-miR-145-5p | 104 | −9.94 | 2 | 8 | 254 | 276 |
hsa-miR-145-5p | 104 | −13.5 | 4 | 22 | 315 | 339 |
hsa-miR-145-5p | 104 | −10.03 | 3 | 21 | 1,367 | 1,390 |
hsa-miR-145-5p | 103 | −10.4 | 2 | 12 | 478 | 500 |
hsa-miR-145-5p | 103 | −11.56 | 2 | 12 | 2,245 | 2,268 |
hsa-miR-145-5p | 102 | −12.31 | 3 | 20 | 2,521 | 2,547 |
hsa-miR-145-5p | 100 | −14.49 | 2 | 7 | 945 | 967 |
Abbreviations: miRNA, microRNA; ROR, regulator of reprogramming.