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. 2018 Jan 25;10(2):473–488. doi: 10.1093/gbe/evy006

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© The Author(s) 2018. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Fig. 3. — —Estimation of the fraction of sites under selection in the rice genome. (A) The fraction of how many species in each clade matched to reference aligned to CDS. Coverage decreased with the increase of the conservation score, but it became stable when the conservation score is close to 0.7. (B–F) Breakdown of sites under selection between coding (CDS) and noncoding regions and among different types of noncoding regions in (B) BEP, (C) Poaceae, (D) Poales, (E) monocots, and (F) all selected genomes.