Table 1.
Characteristics of nuclear genome sequences utilized in this study
| Name | Genome size (nt) | Scaffold number | Unplaced contig number | Gaps | N50 contig length | N50 scaffold length | Technology |
|---|---|---|---|---|---|---|---|
| PKNOH-PacBio | 24 588 173 | N/A | 50 | N/A | 1 207 278 | N/A | PacBio |
| PKNOH-PacBio-Hi-C | 24 771 595 | 14 | 14 | 25 | 16 231 | 1 832 627 | PacBio & Hi-C |
| PKNH V2 | 24 359 384 | 14 | 148 | 77 | N/A | 2 162 603 | Sanger & Illumina |
| PKNA1-C.2 | 24 359 887 | N/A | 45 | N/A | 1 061 780 | N/A | PacBio |
| PKNA1-H.1 | 23 958 038 | N/A | 37 | N/A | 1 017 166 | N/A | PacBio |
N/A, not applicable.
Genome size includes scaffolds and unplaced contigs. Contigs are only unplaced, i.e. non-scaffolded sequences. Gaps are only present in scaffolds. PKNOH data presented here have had organellar sequences removed. Data are from GenBank.