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. 2017 Nov 13;163(2):533–538. doi: 10.1007/s00705-017-3605-9

Table 1.

Percentages of nucleotide and amino acid sequence identity between DBRTV3 and DBALV, DBALV2, DBESV, DBRTV1, DBRTV2, DBSNV and DBTRV as described by Umber et al. [10]. Figures for amino acid sequences are shown in parentheses

Complete genome RT-RNaseH domaina ORF1 ORF2 ORF3
DBALV 60.2% 66.3% (73.3%) 76.9% (84.7%) 55.4% (47.9%) 60.0% (61.3%)
DBALV2 51.0% 71.8% (72.2%) 53.1% (45.5%) 45.2% (35.9%) 55.5% (51.4%)
DBESV 48.7% 65.7% (68.8%) 53.4% (44.1%) 45.7% (32.8%) 51.8% (48.7%)
DBRTV1 59.2% 69.7% (75.6%) 66.9% (72.0%) 58.0% (53.2%) 63.0% (64.3%)
DBRTV2 55.4% 69.1% (70.5%) 61.2% (59.4%) 55.5% (50.4%) 59.0% (59.2%)
DBSNV 73.4% 76.1% (81.8%) 83.6% (91.0%) 72.7% (71.3%) 75.8% (82.2%)
DBTRV 60.4% 66.3% (75.0%) 71.3% (79.2%) 54.7% (54.9%) 61.8% (64.4%)

a RT-RNaseH domain (528 bp long, excluding primer sequences and representing only complete amino acids) used for taxonomic assessment of badnaviruses [13] and typically amplified using the generic badnavirus primer pair Badna-FP/-RP [12]