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. 2018 Feb 6;13(2):e0192379. doi: 10.1371/journal.pone.0192379

Table 5. Homology-supported candidate NJAY secreted proteins to be released as soluble biomolecules.

Gene Homology Info Phobius? SignalP+TMHMM?
contig00074_19 SAP08 (AYWB_387: 76.5%) yes yes
contig00074_6 SAP09 (AYWB_376: 100.0%) yes
contig00073_13 SAP11 (AYWB_370: 100.0%) yes yes
contig00101_1 SAP13 (AYWB_640: 100.0%) yes yes
contig00096_11 SAP15 (AYWB_624: 100.0%) yes
contig00015_15 SAP19 (AYWB_073: 100.0%) yes
contig00037_14 SAP20 (AYWB_645: 35.6%)
contig00003_7 SAP21 (AYWB_022: 59.2%) yes yes
contig00078_3 SAP22 (AYWB_275: 53.4%)
contig00026_1 SAP25 (AYWB_148: 25.7%)
contig00021_24 SAP26 (AYWB_146: 35.7%)
contig00019_4 SAP27 (AYWB_127: 38.3%)
contig00090_33 SAP34 (AYWB_562: 100.0%) yes
contig00092_17 SAP35 (AYWB_588: 92.0%)
contig00120_1 SAP36 (AYWB_189: 33.3%)
contig00037_40 SAP39 (AYWB_212: 100.0%) yes
contig00039_1 SAP40 (AYWB_236: 100.0%) yes
contig00039_2 SAP41 (AYWB_237: 100.0%) yes
contig00040_1 SAP42 (AYWB_258: 80.8%) yes yes
contig00015_31 SAP43 (AYWB_259: 18.9%)
contig00061_2 SAP45 (AYWB_294: 47.3%)
contig00069_2 SAP47 (AYWB_342: 85.5%) yes
contig00008_3 SAP48 (AYWB_340: 42.4%) yes yes
contig00008_2 SAP49 (AYWB_339: 28.7%) yes yes
contig00082_7 SAP50 (AYWB_433: 100.0%) yes
contig00062_1 SAP51 (AYWB_295: 100.0%) yes yes
contig00047_3 SAP52 (AYWB_263: 76.6%) yes
contig00038_2 SAP53 (AYWB_225: 95.2%) yes
contig00038_1 SAP54 (AYWB_224: 61.3%) yes
contig00037_32 SAP55 (AYWB_203: 81.4%) yes yes
contig00073_10 SAP56 (AYWB_367: 100.0%) yes yes
contig00021_23 SAP59 (AYWB_145: 96.8%) yes
contig00027_1 SAP60 (AYWB_152: 29.9%)
contig00034_2 SAP61 (AYWB_169: 80.5%)
contig00038_6 SAP62 (AYWB_229: 57.3%)
contig00039_12 SAP63 (AYWB_245: 72.9%)
contig00064_1 SAP65 (AYWB_329: 99.7%) yes
contig00073_9 SAP66 (AYWB_366: 100.0%) yes
contig00073_11 SAP67 (AYWB_368: 93.3%) yes
contig00073_12 SAP68 (AYWB_369: 95.4%) yes
contig00084_11 SAP69 (AYWB_480: 97.3%) yes
contig00089_7 SAP70 (AYWB_529: 45.6%)
contig00105_24 SAP72 (AYWB_667: 65.8%)

Sequence similarity with apparent AY-WB homologs known to contain a signal peptide (but no transmembrane helices) is shown. Also indicated is whether the model-based methods of Phobius and SignalP+TMHMM predicted the protein in question as harboring a signal peptide. Protein records supported by all three criteria are highlighted with a grey background.