. 2018 Jan 26;12(1):e0006146. doi: 10.1371/journal.pntd.0006146

Table 2. Estimates of Multilocus Linkage Disequilibrium (LD) in Plasmodium vivax populations of the Southwest Pacific.

Population	Subpopulation	All haplotypes, all loci			Confirmed monoclonal haplotypes, all loci
Population	Subpopulation	n	I_A^S	p	n	I_A^S	p
Tetere 2004		21	0.012	0.18	0	n.a.	n.d.
Tetere 2013		31	0.022	0.0042	16	0.033	0.0183
Auki		9	0.081	0.005	6	0.054	0.13
Ngella		165	0.026	<0.00001	61	0.043	<0.00001
	Bay	32	0.041	0.0008	9	0.092	0.0052
	South	17	0.068	0.0003	7	0.163	0.0005
	Channel	29	0.074	<0.00001	9	0.087	0.0053
	North	73	0.038	<0.00001	28	0.076	<0.00001
	Anchor	14	0.069	0.0009	8	0.046	0.0948
Vanuatu		22	0.157	<0.00001	10	0.169	<0.00001
TOTAL		248	n.d.	n.d.	93	n.d.	n.d.

Multilocus LD values from PNG and Tetere 2004 populations are published elsewhere [35]. Complete and unique haplotypes only were used for the analysis, by discarding all but one of the seven clonal haplotypes identified. n = number of haplotypes used in the analysis. I_A^S = Index of Association from LIAN analysis, MOI = multiplicity of infection, n.a. = not available due to sample size constraints, n.d. = not done.