Table 1.
Metrics of the KBS-Mac-74 Oxford Nanopore MinION and Pacific Biosciences Sequel assemblies
| Name | Round (#) | Contig (#) | Total length (bp) | N50 length (bp) | Longest (bp) |
|---|---|---|---|---|---|
| ONTcan | 0 | 82 | 113,402,589 | 8,491,723 | 13,170,991 |
| ONTcan | 1 | 82 | 115,632,969 | 8,666,702 | 13,418,669 |
| ONTcan | 2 | 82 | 115,735,933 | 8,671,757 | 13,431,826 |
| ONTcan | 3 | 82 | 115,781,606 | 8,673,416 | 13,434,963 |
| ONTcan | 4 | 82 | 117,857,778 | 8,825,005 | 13,671,933 |
| ONTmin | 0 | 62 | 110,880,468 | 11,450,026 | 13,809,770 |
| ONTmin | 1 | 62 | 117,109,669 | 12,091,692 | 14,572,214 |
| ONTmin | 2 | 62 | 117,377,831 | 12,118,333 | 14,600,216 |
| ONTmin | 3 | 62 | 117,441,618 | 12,123,124 | 14,605,848 |
| ONTmin | 4 | 62 | 119,502,799 | 12,334,794 | 14,864,299 |
| PBfal | 0 | 78 | 119,340,317 | 10,700,858 | 13,315,705 |
| PBfal | 1 | 78 | 119,755,332 | 10,737,485 | 13,359,771 |
| PBfal | 4 | 78 | 119,750,280 | 10,736,982 | 13,359,931 |
Assembly types: Oxford Nanopore MinION, ONT; PacBio Sequel, PB; miniasm, min; Falcon, fal; Canu, can. Polishing rounds PBfal: 0 = raw assembly; 1, arrow 1x; 4, pilon 1x