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. 2013 Sep;15(5):634–641. doi: 10.1016/j.jmoldx.2013.05.005

Table 1.

Primer, Probe, and IC Sequences

Test no. Primer/probe Sequence Label Concentration (nmol/L)
1 Forward primer 5′-CTAGGCTGCACGCGTGCTACACTGATA-3′ None 40
Reverse primer 5′-TAATTGCAATAATCTATCCCCATCACG-3′ 5′ Biotin 120
Probe for all 5 Plasmodium species 5′-GAAAAGTGTAGGTAATCTTTATCA-3′ 3′ DIG 50
Probe for P. falciparum 5′-ATATTTGTATCTTTGCTTATATT-3′ 3′ FAM 30
Probe for IC 5′-CCGCTATTTCATAGTAAGTC-3′ 3′ DNP 30
IC 1 5′-CTAGGCTGCACGCGTGCTACACTGATACAACATTGACAACTAAAACCGCTATTTCATAGTAAGTCCTTCGTCTATGACTATCTGTGCCAAATCATCTAGCAAACTGCTAATCCAATTTATTTCATCAAATCGTGATGGGGATAGATTATTGCAATTA-3′ None 500 Copies
2 Forward primer 5′-CGATTCAGCTTGCTGTTTCGTA-3′ None 50
Reverse primer Same as in test 1 None 100
Probe for P. vivax Same as in test 1 3′ DIG 30
Probe for IC Same as in test 1 3′ DNP 30
IC 2 5′-CGATTCAGCTTGCTGTTTCGTATTTTTCCTCAACATTGACAACTAAAACCGCTATTTCATAGTAAGTCCTTCGTCTATGACTATCTGTGCCAAATCATCTAGCAAACTGCTAATCCAATTTATTTCATCAAATCGTGATGGGGATAGATTATTGCAATTA-3′ None 2000 Copies

Forward and reverse primer-binding regions are underlined.