Table 1.
Fragment | Segregating sites (S) | Singleton variable sites | Parsimony informative sites | Total no. of mutations | K | H | Hd ± SD | π ± SD | dN − dS | Tajima’s D |
---|---|---|---|---|---|---|---|---|---|---|
5ʹ-Terminal | 5 | 1 | 4 | 5 | 1.253 | 8 | 0.702 ± 0.052 | 0.00282 ± 0.00027 | − 0.00227 | 0.37596 (P > 0.1) |
Domain I | 37 | 4 | 33 | 38 | 9.796 | 27 | 0.912 ± 0.024 | 0.02120 ± 0.00161 | 0.02516 | 0.64221 (P > 0.1) |
Domain II | 12 | 4 | 8 | 12 | 2.234 | 12 | 0.860 ± 0.023 | 0.00752 ± 0.00057 | 0.00794 | − 0.39855 (P > 0.1) |
Domain III | 13 | 5 | 8 | 13 | 3.275 | 14 | 0.871 ± 0.024 | 0.01629 ± 0.00080 | 0.01484 | 0.48627 (P > 0.1) |
3ʹ-Terminal | 8 | 2 | 6 | 8 | 1.987 | 10 | 0.761 ± 0.027 | 0.00581 ± 0.00047 | 0.00658 | 0.39702 (P > 0.1) |
Full | 78 | 16 | 62 | 79 | 19.886 | 37 | 0.948 ± 0.019 | 0.01064 ± 0.00051 | 0.01076 | 0.57189 (P > 0.1) |
K, average number of pairwise nucleotide differences; H, number of haplotypes; Hd, haplotype diversity; π, observed average pairwise nucleotide diversity; dN, rate of non-synonymous mutations; dS, rate of synonymous mutations