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. 2016 Mar 25;62(6):687–697. doi: 10.1093/cz/zow044

Table 2.

Polymorphism of M-type and F-type mtDNAs

gene pD nt 95% CI pD nt 95% CI pD aa 95% CI pD aa 95% CI
F type M type F type M type
atp6 0.016 0.012–0.020 0.019 0.013–0.025 0.019 0.011–0.027 0.020 0.010–0.030
cox3 0.018 0.014–0.022 0.021 0.015–0.027 0.025 0.015–0.035 0.026 0.016–0.036
nd3 0.013 0.007–0.019 0.006 0.002–0.010 0.021 0.009–0.033 0.013 0.000–0.027
nd4 0.015 0.011–0.019 0.013 0.009–0.017 0.022 0.016–0.028 0.015 0.009–0.021
nd5 0.008 0.006–0.010 0.016 0.012–0.020 0.012 0.008–0.016 0.014 0.008–0.020
nd6 0.019 0.013–0.025 0.018 0.012–0.024 0.025 0.013–0.037 0.025 0.011–0.039
rphf22 0.009 0.003–0.015 NA NA 0.014 0.004–0.024 NA NA
rphm21 NA NA 0.006 0.002–0.010 NA NA 0.007 0.001–0.013

gene pS 95% CI pS 95% CI pN 95% CI pN 95% CI
F type M type F type M type

atp6 0.029 0.015–0.043 0.031 0.017–0.045 0.011 0.005–0.017 0.012 0.006–0.018
cox3 0.031 0.017–0.045 0.037 0.021–0.053 0.013 0.007–0.019 0.015 0.009–0.021
nd3 0.016 0.004–0.028 0.005 0.000–0.013 0.011 0.003–0.019 0.006 0.000–0.012
nd4 0.027 0.017–0.037 0.021 0.013–0.029 0.012 0.008–0.016 0.008 0.004–0.012
nd5 0.013 0.005–0.021 0.034 0.024–0.044 0.005 0.003–0.007 0.008 0.004–0.012
nd6 0.037 0.019–0.055 0.020 0.006–0.034 0.012 0.006–0.018 0.013 0.005–0.021
rphf22 0.020 0.002–0.038 NA NA 0.007 0.001–0.013 NA NA
rphm21 NA NA 0.011 0.001–0.021 NA NA 0.003 0.000–0.007

Note: pD nt = nucleotide p-distance; pD aa = amino acid p-distance; 95% CI = 95% confidence interval; pS = synonymous polymorphism (number of synonymous substitutions per synonymous site); pN = nonsynonymous polymorphism (number of nonsynonymous substitutions per nonsynonymous site); NA = not available. Only genes with ≥ 10 sequences available were utilized in the analyses.