Table 2:

Codeset design for Nanostring

Gene	Accession	Position	NSID
asf1	NM_079439.2	601–700	NM_079439.2: 600
Caf1-105	NM_136745.3	1231–1330	NM_136745.3: 1230
Def	NM_078948.2	8–107	NM_078948.2: 7
E(bx)	NM_167819.2	4681–4780	NM_167819.2: 4680
E(Pc)	NM_078974.2	2551–2650	NM_078974.2: 2550
E(spl)m4-BFM	NM_079786.1	241–340	NM_079786.1: 240
E(spl)m5-HLH	NM_079787.2	396–495	NM_079787.2: 395
Fbp1	NM_079341.1	3001–3100	NM_079341.1: 3000
Mnf	NM_168444.1	866–965	NM_168444.1: 865
Hml	NM_079336.2	7236–7335	NM_079336.2: 7235
Hmt4-20	NM_130497.2	3201–3300	NM_130497.2: 3200
Inos	NM_058057.4	1026–1125	NM_058057.4: 1025
Lip3	NM_057983.3	946–1045	NM_057983.3: 945
Lsd-1	NM_170092.2	836–935	NM_170092.2: 835
Lsp1beta	NM_057276.3	1351–1450	NM_057276.3: 1350
Ocho	NM_080514.1	416–515	NM_080514.1: 415
Pc	NM_079475.2	991–1090	NM_079475.2: 990
Pgm	NM_079936.2	841–940	NM_079936.2: 840
Rpl32	NM_170461.1	342–441	NM_170461.1: 341
Sap30	NM_132934.2	216–315	NM_132934.2: 215
Su(var)3-3	NM_140937.2	1781–1880	NM_140937.2: 1780
Su(var)3-7	NM_079618.2	3516–3615	NM_079618.2: 3515
Top2	NM_057412.3	3111–3210	NM_057412.3: 3110
Tps1	NM_134983.2	2056–2155	NM_134983.2: 2055
Ubx	NM_206497.1	1321–1420	NM_206497.1: 1320

Gene, gene symbol based on FlyBase nomenclature; NSID, Nanostring internal identifier; Position, region in the target mRNA being probed.