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. 2018 Feb 5;18(1):10. doi: 10.1093/jisesa/iex102

Table 2.

Relative transcript abundance of selected homologs of Cry receptor proteins in the midgut of BPH

Deduced gene RPKM Relative abundance (△CT±SD)
bphcadherin1 5.59 6.68 ± 0.86
bphcadherin2 20.39 7.41 ± 0.94
bphcadherin3 3.7 5.45 ± 0.75
bphcadherin4 0.69 2.08 ± 0.89
bphAPN1 1182.63 10.88 ± 0.23
bphAPN2 5.05 3.19 ± 0.37
bphAPN3 2.00 3.18 ± 0.45
bphAPN4 1263.03 10.25 ± 0.24
bphAPN5 10.39 5.39 ± 0.50
bphALP1 0.29 1.08 ± 0.34
bphALP2 9.59 1.45 ± 0.41
bphALP3 0.59 0.76 ± 0.52
bphALP4 302.37 8.67 ± 0.29
bphALP5 2.06 1.70 ± 0.41
bphALP6 2020.66 11.67 ± 0.22

Reads Per Kilo base per million mapped reads (RPKM) of was calculated to predict transcript abundance of putative Bt receptor genes. The relative abundance (△Ct) of selected APNs, ALPs, and cadherins in the midgut was normalized using the BPH 18s rRNA threshold cycle (Ct) values that were obtained from reactions run on the same plate.