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. 2018 Feb 8;15:32. doi: 10.1186/s12985-018-0943-5

Table 1.

Primers used in the generation of HEV Rluc replicons and their mutants

Primer IDs Primer Sequencea Modificationsb
Replicon
TW4675F 5’ GCTATGAGTTCCGGGACCTCAA 3’ TW6196-Rluc
TW5168R 5’ GGTGGCATCGCCATGCAA 3’
TWJRhRlucU 5’ TTGCATGGCGATGCCACC ATGGCTTCCAAGGTGTACGAC 3′
TWhRlucL 5’ AGAATTCAGCGCTGCTAGCTATTACTGCTCGTTCTTCAGCACG 3’
SWhRluc1U 5’ TGCATCGCCCATGGGATCACCATGGCTTCCAAGGTGTACGAC 3’ pSHEV3-Rluc
SWhRluc915L 5’ CGGTTAACATATGCTAGCCTATTACTGCTCGTTCTTCAGCACG 3’
SWHEV4623U 5’ CGCCGAAGGAGTCTCTTAAGGGT 3’
SWHEV5208L 5’ GTCGTACACCTTGGAAGCCATGGTGATCCCATGGGCGATGCA 3’
Mutagenic
HEV3MvaU 5’ GTGAGGTCGGCATTTCGGATGCAATTGTCAATAACTTTTTCCTTG 3’ V1213A
HEV3MvaL 5’ CAAGGAAAAAGTTATTGACAATTGCATCCGAAATGCCGACCTCAC 3’
HEV3MqhU 5’ GATCAGAACCTCGGGACTCTACATGCCTTCCCGCCGTCCTGCCAG 3′ Q/H
HEV3MqhL 5’ CTGGCAGGACGGCGGGAAGGCATGTAGAGTCCCGAGGTTCTGATC 3’
HEV3MspU 5’ GTCTATGGGGGCCGGGCCTCATAGCCTCACTTATG 3’ S605P
HEV3MspL 5’ CATAAGTGAGGCTATGAGGCCCGGCCCCCATAGAC 3’
HEV3MivU 5’ GCTTGTGCCGGCTGCACTGTTAGTCCTGGGATTG 3′ I978V
HEV3MivL 5’ CAATCCCAGGACTAACAGTGCAGCCGGCACAAGC 3’
HEV3MvaHU 5’ GTGAGGTCGGCATTTCGGATGCTATTGTCAATAACTTTTTCCTTG 3’ V1213A (2nd)
TWMavU 5’ TGAGGTGGGTATCTCTGATGTTATTGTTAACAACTTCTTCC 3′ A1213V TW6196
TWMavL 5’ GGAAGAAGTTGTTAACAATAACATCAGAGATACCCACCTCA 3′
HEV2MavU 5’ GCGAGGTGGGCATCTCCGATGTGATCGTTAATAACTTTTTCCTTG 3’ A1213V Sar55
HEV2MavL 5’ CAAGGAAAAAGTTATTAACGATCACATCGGAGATGCCCACCTCGC 3’

aSequences of primers

bRluc inserted into HEV genomes or amino acid mutation introduced by the primer