Table 3. Upregulated genes in dorsal and ventral retina following a PT injury.

Fold changes comparing injured retina to region matched normal controls.

Gene Symbol	GeneBank ID	Dorsal retina / FC Injured/normal		Ventral retina/ FC Injured/normal		Function
		Day 1	Day 7	Day 1	Day 7
Ecel1	NM_021776	16.20 *	11.80 *		2.10	Proteolysis
Timp1	NM_053819	4.60 *	3.30 *	-2.25 *		Metalloendopeptidase inhibitor activity
Mt2A	NM_001137564	4.50 *	4.30 *			Cellular zinc ion homeostasis
CD74	NM_013069	4.10 *	4.10 *			Activation of MAPK activity
Gfap	NM_017009	4.00 *	3.45 *	-2.20 *		Response to wounding (glia)
S100a11	NM_001004095	3.40 *	2.40*			Calcium ion binding
Gpnmb	NM_133298	3.40 *	2.80 *			Cell adhesion
Tmem47	NM_001109317	3.30 *	2.40 *			Cell-cell junction
Egr1	NM_012551	3.30 *	2.80 *			Negative regulation of transcription from RNA polymerase II promoter
Arhgdib	NM_001009600	3.20 *	2.50 *			Rho GDP-dissociation inhibitor activity
H2afy2	NM_001135807	3.20 *	2.50 *			Nucleosome assembly
Bgn	NM_017087	3.10 *	2.40*			Blood vessel remodelling
Tagln2	NM_001013127	3.00 *	2.70 *		1.50*	Tumor suppressor
Dhdh	XM_003748855	2.90 *				D-xylose catabolic process
Sprr1a	NM_021864	2.90 *	2.10 *			Peptide cross-linking
Atf3	NM_012912	2.90 *	2.40*	1.50*		Cell fate determination
Tmem108	XM_008757857		2.10*		2.20*
Rgr	NM_001107299		2.30*		2.30*	Retinal G-protein coupled receptor

Expression of significantly upregulated genes by fold change ≥ 2. Significance of p-value is indicated by *. Values that may not fall within those parameters are added for the purpose of comparison. Identified and known genes included in the table.