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. 2018 Feb 5;9:83. doi: 10.3389/fpls.2018.00083

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Copyright © 2018 Clevenger, Chu, Chavarro, Botton, Culbreath, Isleib, Holbrook and Ozias-Akins.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Quantitative trait loci (QTL)-seq identifies significant QTL for controlling LLS resistance. Scatter plots for chromosomes A05 (top), B05 (middle), and B03 (bottom). Each graph is a scatter plot of each ΔSNP (R-Bulk SNP Index–S-Bulk SNP Index) plotted against the physical position based on the A. duranensis (A) and A. ipaensis (B) pseudomolecules. The dark red line represents a sliding window of 2 Mb moving 500 kb intervals. Statistical confidence intervals under the null hypothesis of no QTL are plotted for each marker (blue – p < 0.05 and red – p < 0.01). Gray shaded boxes indicate significant QTL.