Table 1.
Details of bHLH gene family for strawberry.
Name | Accession no. | length(bp) | No. of aa | Mw(Da) | pI | Chr. | Location | Group |
---|---|---|---|---|---|---|---|---|
FvbHLH1 | XM_004287073 | 1999 | 459 | 39465.8 | 6.67 | LG1 | 774071..777509 | VII(a + b) |
FvbHLH2 | XM_011472368 | 1508 | 353 | 39258.2 | 4.83 | LG1 | 5628786..5630945 | III(a + c) |
FvbHLH3 | XM_011472373 | 999 | 328 | 35846.2 | 5.09 | LG1 | 5633593..5635348 | III(a + c) |
FvbHLH4 | XM_004288907 | 2261 | 609 | 68051 | 7.62 | LG1 | 6270695..6273919 | IVd |
FvbHLH5 | XM_011462840 | 1688 | 422 | 46054.2 | 4.71 | LG1 | 7257743..7260881 | XI |
FvbHLH6 | XM_004287765 | 1722 | 321 | 35480.6 | 7.04 | LG1 | 8558473..8560804 | IVb |
FvbHLH7 | XM_011464708 | 1979 | 378 | 41465.2 | 9.25 | LG1 | 9553758..9555736 | VIII |
FvbHLH8 | XM_004287975 | 1584 | 376 | 40793.2 | 5.27 | LG1 | 10770968..10773625 | VII(a + b) |
FvbHLH9 | XM_004287983 | 1126 | 250 | 27603.6 | 9.81 | LG1 | 10839398..10840523 | VIIIb |
FvbHLH10 | XM_004288109 | 1417 | 335 | 37562.9 | 6.2 | LG1 | 12901813..12903720 | Ia |
FvbHLH11 | XM_011468187 | 1629 | 351 | 39316.2 | 6.03 | LG1 | 15128707..15131319 | IVa |
FvbHLH12 | XM_004288253 | 1878 | 352 | 39142.8 | 6.13 | LG1 | 15140049..15142329 | IVa |
FvbHLH13 | XM_004288264 | 1519 | 365 | 40767.6 | 4.64 | LG1 | 15309610..15311394 | IIIb |
FvbHLH14 | XM_004289363 | 1400 | 296 | 33300.1 | 6.19 | LG1 | 15852165..15853564 | VIIIb |
FvbHLH15 | XM_004288393 | 968 | 240 | 27430.5 | 9.35 | LG1 | 18393887..18395702 | Ib |
FvbHLH16 | XM_004289479 | 880 | 216 | 23826 | 10.2 | LG1 | 19941466..19942513 | Vb |
FvbHLH17 | XM_004289620 | 1724 | 422 | 46479.1 | 6.06 | LG2 | 1449671..1452519 | XII |
FvbHLH18 | XM_004289703 | 1445 | 273 | 29597.9 | 7.62 | LG2 | 2948918..2950935 | X |
FvbHLH19 | XM_004289751 | 2926 | 454 | 48833.1 | 8.64 | LG2 | 3904357..3908604 | VII(a + b) |
FvbHLH20 | XM_004292083 | 810 | 269 | 30282.7 | 4.95 | LG2 | 3955128..3956367 | VIIIc |
FvbHLH21 | XM_011461385 | 1084 | 349 | 38855.1 | 5.38 | LG2 | 3963999..3965470 | VIIIc |
FvbHLH22 | XM_011459605 | 1565 | 332 | 37043.7 | 8.94 | LG2 | 4390466..4392690 | IVa |
FvbHLH23 | XM_011459618 | 1462 | 325 | 35939.1 | 5.95 | LG2 | 4612200..4615547 | IVb |
FvbHLH24 | XM_004289847 | 1561 | 292 | 31061.1 | 5.91 | LG2 | 5528604..5532429 | XI |
FvbHLH25 | XM_011459681 | 2241 | 504 | 55378.5 | 5.77 | LG2 | 5784856..5787096 | III(d + e) |
FvbHLH26 | XM_011459763 | 2595 | 518 | 56543.3 | 5.83 | LG2 | 7260709..7265049 | VII(a + b) |
FvbHLH27 | XM_004292295 | 2144 | 544 | 59176.8 | 6.42 | LG2 | 8870693..8873438 | XII |
FvbHLH28 | XM_004290363 | 1260 | 244 | 27544 | 6.2 | LG2 | 12507957..12509504 | Ib |
FvbHLH29 | XM_004290615 | 2955 | 702 | 77736.9 | 5.54 | LG2 | 16556642..16562043 | IIIf |
FvbHLH30 | XM_004290623 | 1197 | 296 | 33052.3 | 5.3 | LG2 | 16628469..16632121 | VIII |
FvbHLH31 | XM_011460379 | 2134 | 583 | 66027.7 | 5.22 | LG2 | 17537839..17540937 | IIIb |
FvbHLH32 | XM_011460381 | 2473 | 674 | 76146.1 | 5.16 | LG2 | 17543996..17547612 | IIIb |
FvbHLH33 | XM_011461514 | 1208 | 381 | 42148.2 | 5.05 | LG2 | 19839411..19840894 | VIIIc |
FvbHLH34 | XM_004290949 | 2921 | 430 | 46646.8 | 5.58 | LG2 | 20151639..20155328 | XII |
FvbHLH35 | XM_011460622 | 1425 | 324 | 35244.1 | 5.88 | LG2 | 20942790..20945565 | VII(a + b) |
FvbHLH36 | XM_004292764 | 1164 | 244 | 27373 | 7.96 | LG2 | 21026021..21027184 | VIIIb |
FvbHLH37 | XM_011461186 | 1047 | 262 | 29141.9 | 6.61 | LG2 | 30979646..30981384 | Vb |
FvbHLH38 | XM_004291800 | 2076 | 468 | 50979.6 | 7.79 | LG2 | 32278737..32282900 | X |
FvbHLH39 | XM_004293556 | 1718 | 244 | 27140 | 4.9 | LG3 | 2254773..2258017 | XIV |
FvbHLH40 | XM_011461973 | 1389 | 93 | 10385.6 | 5.07 | LG3 | 3263115..3264716 | XV |
FvbHLH41 | XM_011462057 | 1986 | 484 | 51788 | 5.46 | LG3 | 4011392..4014350 | X |
FvbHLH42 | XM_011462059 | 1003 | 216 | 24434 | 5.44 | LG3 | 4026675..4028036 | III(a + c) |
FvbHLH43 | XM_011462115 | 1885 | 286 | 32432.7 | 5.44 | LG3 | 4881126..4883099 | VIII |
FvbHLH44 | XM_011462301 | 2375 | 262 | 28591.3 | 7.74 | LG3 | 7317885..7322470 | Vb |
FvbHLH45 | XM_004293965 | 1075 | 187 | 20972.7 | 7.02 | LG3 | 8396475..8397892 | Ib |
FvbHLH46 | XM_004294266 | 2082 | 448 | 49286.4 | 6.4 | LG3 | 13388482..13391583 | X |
FvbHLH47 | XM_004294288 | 1229 | 231 | 25421 | 8.44 | LG3 | 13637964..13641643 | IVc |
FvbHLH48 | XM_004295162 | 3075 | 431 | 47638.7 | 6.09 | LG3 | 27564756..27568579 | IX |
FvbHLH49 | XM_004296310 | 1113 | 231 | 25855.3 | 6.02 | LG4 | 53766..56495 | IVc |
FvbHLH50 | XM_004296450 | 1106 | 244 | 27632.5 | 5.46 | LG4 | 4132264..4135925 | III(a + c) |
FvbHLH51 | XM_004296502 | 1059 | 94 | 10600 | 7.93 | LG4 | 5165859..5167450 | XV |
FvbHLH52 | XM_004296662 | 1799 | 350 | 37266.4 | 8.78 | LG4 | 7927705..7935898 | IX |
FvbHLH53 | XM_004296894 | 1024 | 202 | 22735.5 | 9.27 | LG4 | 12705986..12707777 | Ia |
FvbHLH54 | XM_004296937 | 2317 | 550 | 59476.9 | 6.3 | LG4 | 14464166..14467207 | XII |
FvbHLH55 | XM_004297098 | 1619 | 345 | 38323.1 | 6.07 | LG4 | 16335664..16338026 | Vb |
FvbHLH56 | XM_004297136 | 3010 | 550 | 59018.9 | 5.25 | LG4 | 16797062..16800740 | XII |
FvbHLH57 | XM_004297147 | 1599 | 331 | 36302.8 | 5.95 | LG4 | 16909459..16912235 | Va |
FvbHLH58 | XM_004297270 | 1047 | 98 | 11187.5 | 9.03 | LG4 | 18127224..18128727 | XV |
FvbHLH59 | XM_004297447 | 2201 | 535 | 58210 | 5.81 | LG4 | 19786891..19789971 | IIIb |
FvbHLH60 | XM_004298488 | 1789 | 339 | 37867.3 | 7.12 | LG4 | 19872469..19875066 | XII |
FvbHLH61 | XM_011465048 | 1910 | 436 | 48434.6 | 6.18 | LG4 | 21544358..21546437 | VIIIb |
FvbHLH62 | XM_004298520 | 1812 | 464 | 52734.2 | 6.36 | LG4 | 21671222..21673829 | III(a + c) |
FvbHLH63 | XM_004297644 | 1599 | 275 | 29997.3 | 6.02 | LG4 | 22264260..22267220 | XII |
FvbHLH64 | XM_011465190 | 2108 | 533 | 58065.7 | 6.78 | LG4 | 23023913..23027032 | orphans |
FvbHLH65 | XM_004300691 | 1309 | 262 | 29626.9 | 6.42 | LG5 | 686954..688474 | Ib |
FvbHLH66 | XM_004298754 | 3254 | 636 | 71225.1 | 5.51 | LG5 | 1485513..1490045 | IIIf |
FvbHLH67 | XM_004298887 | 836 | 191 | 21670.1 | 9.72 | LG5 | 2965347..2966500 | Ib |
FvbHLH68 | XM_004300913 | 1850 | 412 | 45859.4 | 6.39 | LG5 | 4025201..4029399 | orphans |
FvbHLH69 | XM_004299007 | 1180 | 276 | 31128.1 | 6.45 | LG5 | 4234865..4236694 | XII |
FvbHLH70 | XM_004299222 | 2515 | 571 | 62714.7 | 8 | LG5 | 7347973..7353265 | Va |
FvbHLH71 | XM_004301080 | 1492 | 394 | 44179.6 | 7.83 | LG5 | 7937035..7939413 | VII(a + b) |
FvbHLH72 | XM_004299332 | 1209 | 246 | 26920.3 | 5.99 | LG5 | 8368043..8370357 | IVb |
FvbHLH73 | XM_004299336 | 984 | 92 | 10426.7 | 9.17 | LG5 | 8419238..8420695 | XV |
FvbHLH74 | XM_004299574 | 1299 | 274 | 29662.9 | 5.68 | LG5 | 10962434..10965206 | XII |
FvbHLH75 | XM_004299639 | 1500 | 340 | 38514.2 | 6.16 | LG5 | 12157286..12159348 | Ia |
FvbHLH76 | XM_004301340 | 1020 | 339 | 38024.9 | 4.71 | LG5 | 13269137..13271499 | VIIIc |
FvbHLH77 | XM_011466454 | 1192 | 224 | 24295.2 | 5.29 | LG5 | 14535826..14540081 | IX |
FvbHLH78 | XM_004299778 | 1442 | 354 | 40009.1 | 4.85 | LG5 | 14623387..14625157 | IIIb |
FvbHLH79 | XM_011466590 | 1909 | 386 | 41948.8 | 6.7 | LG5 | 17225517..17229489 | X |
FvbHLH80 | XM_004300191 | 2690 | 682 | 74856.2 | 5.52 | LG5 | 21462279..21464968 | III(d + e) |
FvbHLH81 | XM_004300360 | 1268 | 321 | 35418.5 | 6.67 | LG5 | 24315240..24317523 | Ia |
FvbHLH82 | XM_004300469 | 1196 | 295 | 32841.5 | 5.45 | LG5 | 25509922..25511575 | XII |
FvbHLH83 | XM_004302005 | 2095 | 339 | 36374.6 | 6.07 | LG6 | 538981..543382 | XI |
FvbHLH84 | XM_004302277 | 2778 | 710 | 76643.7 | 6.08 | LG6 | 3989352..3994265 | VII(a + b) |
FvbHLH85 | XM_004302404 | 1427 | 342 | 39041.4 | 5.67 | LG6 | 5477305..5478975 | Ia |
FvbHLH86 | XM_011470140 | 525 | 174 | 19761.3 | 8.71 | LG6 | 7363269..7363793 | VIIIb |
FvbHLH87 | XM_011468604 | 997 | 230 | 26241.7 | 6.14 | LG6 | 14930398..14931670 | Ib |
FvbHLH88 | XM_004305478 | 1408 | 298 | 32732.1 | 6.59 | LG6 | 18431373..18433464 | VIIIc |
FvbHLH89 | XM_004303853 | 2182 | 540 | 59336.8 | 7.66 | LG6 | 27360228..27363650 | VII(a + b) |
FvbHLH90 | XM_004304146 | 1469 | 322 | 36058.5 | 5.7 | LG6 | 30729849..30733592 | Va |
FvbHLH91 | XM_004304266 | 1728 | 319 | 35277.2 | 8.32 | LG6 | 32166984..32169818 | IX |
FvbHLH92 | XM_004304269 | 1670 | 352 | 38982.9 | 5.97 | LG6 | 32238590..32243935 | XII |
FvbHLH93 | XM_004308165 | 1937 | 429 | 47554.5 | 8.19 | LG7 | 1392304..1395438 | IX |
FvbHLH94 | XM_011470561 | 1430 | 294 | 33574.5 | 6.15 | LG7 | 2332756..2334886 | VIII |
FvbHLH95 | XM_004306563 | 2160 | 420 | 46844.5 | 6.1 | LG7 | 2743026..2745885 | Ia |
FvbHLH96 | XM_004306579 | 1955 | 491 | 54529.8 | 5.03 | LG7 | 2955020..2956974 | III(d + e) |
FvbHLH97 | XM_004306609 | 3013 | 616 | 67483 | 6.11 | LG7 | 3395170..3398461 | III(d + e) |
FvbHLH98 | XM_004308329 | 2615 | 643 | 71423.8 | 5.42 | LG7 | 5102380..5106265 | IIIf |
FvbHLH99 | XM_011470775 | 1286 | 361 | 39894.6 | 6.6 | LG7 | 5799342..5800960 | Ia |
FvbHLH100 | XM_004308575 | 2010 | 465 | 52012.7 | 5.61 | LG7 | 11372618..11375286 | II |
FvbHLH101 | XM_011471173 | 1907 | 243 | 27413.7 | 5.92 | LG7 | 12278020..12280123 | Ib |
FvbHLH102 | XM_004307508 | 1708 | 446 | 50855 | 6.11 | LG7 | 17017617..17022889 | X |
FvbHLH103 | XM_004307626 | 1299 | 261 | 28984 | 9.04 | LG7 | 18389468..18391089 | Vb |
FvbHLH104 | XM_004309112 | 1767 | 366 | 40022.1 | 5.39 | LG7 | 21789731..21792322 | Ia |
FvbHLH105 | XM_004308085 | 1469 | 254 | 28708.4 | 5.51 | LG7 | 23053917..23055551 | Ib |
FvbHLH106 | XM_011472396 | 792 | 196 | 21478.6 | 9.61 | LG7 | 23057596..23058575 | Ib |
FvbHLH107 | XM_004308087 | 1609 | 261 | 29145.2 | 9.42 | LG7 | 23060616..23062531 | Ib |
FvbHLH108 | XM_004309700 | 2236 | 365 | 40673.8 | 7.06 | Un | 17881..23082 | Ib |
FvbHLH109 | XM_004309608 | 1230 | 245 | 26615.1 | 5.83 | Un | 32335..34765 | IVc |
FvbHLH110 | XM_004309546 | 1181 | 166 | 18402 | 9.1 | Un | 56243..60570 | X |
FvbHLH111 | XM_011459272 | 3679 | 780 | 85359.2 | 5.24 | Un | 147469..152520 | XIII |
FvbHLH112 | XM_011459212 | 949 | 175 | 19447.2 | 5.77 | Un | 1751808..1753619 | XII |
FvbHLH113 | XM_004310203 | 1028 | 171 | 19329.6 | 11.5 | Un | 1966158..1967185 | XV |
Accession numbers are available in the National center for Biotechnology Information database. Mw, molecular weight; pI, isoelectric point.