Table 1.
Examples of potential applications of transfer learning methods in drug design.
Transfer learning approach | Concept | Application in drug design |
---|---|---|
Instance-based | Uses the same ML technique for modeling but apply some changes to the parameters of the target model. | Source and target datasets have the same endpoint (e.g., same molecular target) but the training data can be colleted at different experimental conditions. |
Feature representation | Based on some mathematical transformations of data. | Source and target datasets have different but related endpoints, e.g., same classes of molecular target (kinases, nuclear receptors, proteases, etc.). |
Parameters | It is assumed that both datasets share some properties. | Source and target datasets have the same or related endpoints. |
Relational knowledge transfer | Based on technique for mapping the data in the target domain. | The endpoints of the source and target datasets are different but the domains (the independent variable in QSAR models) are related; e.g., cellular permeability and log P. |