Table 3.
Significant marker–trait associations for the traits network lengths distribution (NLD), network volume (NV), network convex area (NCA) and minor eclipse axis (MiEA)
| Marker–trait association | Nearest gene | ||||||
|---|---|---|---|---|---|---|---|
| Trait | Treatment | Chromosome | Position (bp) | P-value | ID | Start position (bp) | Description |
| NLD | HP | SBI-02 | 2 209 409 | 1.35E-06 | Sb02g002180 | 2 205 025 | Uncharacterized |
| NLD | LP | SBI-02 | 3 725 908 | 1.56E-06 | Sb02g003260 | 3 724 427 | Armadillo-type fold, Fanconi anaemia protein FANCD2 |
| NV | HP | SBI-02 | 6 171 759 | 2.46E-08 | Sb02g005290 | 6 174 218 | Uncharacterized |
| NLD | HP | SBI-03 | 3 201 076 | 2.86E-06 | Sb03g003110 | 3 207 828 | Zinc finger, C3H-type transcription factor |
| NCA | HP | SBI-03 | 68 303 195 | 7.40E-07 | Sb03g040800 | 68 297 624 | Serine/threonine-protein kinase, active site |
| MiEA | HP | SBI-03 | 68 303 195 | 1.36E-06 | Sb03g040800 | 68 297 624 | Serine/threonine-protein kinase, active site |
| NLD | HP | SBI-05 | 58 660 907 | 1.34E-07 | Sb05g025360 | 58 660 524 | Protein of unknown function DUF594 |
| NLD | HP | SBI-09 | 51 109 156 | 1.76E-07 | Sb09g021620 | 51 107 666 | Fructose-1,6-bisphosphatase class 1/ Sedoheputulose-1,7-bisphosphatase |