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. 2018 Feb 12;8:2857. doi: 10.1038/s41598-018-21255-7

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Differentially abundant bacteria identified comparing different treatments at 7 days post S. Typhimurium infection. Each dot represents a different OTU identified within a genus. (a) Control compared to Sal, a positive log fold change indicates enrichment in the Sal group. (b) Control compared to Sal Law, a positive log fold change indicates enrichment in the Sal Law group; (c) Sal compared to Sal Law, a positive log fold change indicates enrichment in the Sal Law group; (d) Sal Law compared Sal Law Vac, a positive log fold change indicates enrichment in the Sal Law Vac group. *OTU sequences closely related to Clostridium butyricum.