Table 4.
Thirty-seven genes selected and listed according to their arCOG.
| arCOG | Genes selected |
|---|---|
| METABOLISM | |
| E: Amino acid metabolism and transport | (11) Saci_0798* |
| F: Nucleotide metabolism and transport | (6′) Saci_1191 |
| INFORMATION STORAGE AND PROCESSING | |
| K: Transcription | (2′) Saci_0102; (3′) Saci_0800; (14) Saci_0942; (16) Saci_1012; (5′) Saci_1107; (8′) Saci_1341; (25) Saci_2136* |
| L: Replication, recombination and repair | (1′) Saci_0001*; (2) Saci_0052; (3) Saci_0053*; (4) Saci_0129; (7) Saci_0651*; (8) Saci_0715*; (9) Saci_0722*; (10) Saci_0788*; (12) Saci_0900*; (4′) Saci_0903*; (15) Saci_0975; (18) Saci_1280*; (7′) Saci_1283*; (22) Saci_1490*; (9′) Saci_1537*; (11′) Saci_1975; (12′) Saci_2156 |
| CELLULAR PROCESSES AND SIGNALING | |
| D: Cell cycle control | (6) Saci_0204; (19) Saci_1372*; (20) Saci_1373 |
| T: Signal transduction mechanisms | (17) Saci_1193*; (10′) Saci_1694* |
| V: Defense mechanisms | (23) Saci_1989 |
| POORLY CHARACTERIZED | |
| R: General functional prediction only | (1) Saci_0046*; (13) Saci_0925; (21) Saci_1374; (24) Saci_2119 |
| S: Function unknown | (5) Saci_0203* |
Genes containing at least one recognition sequence 5′-GATC-3′ in the two contexts (5′-AGATCC-3′ and 5′-GGATCC-3′) are marked by an asterisk. Number into bracket written before the old locus name is used to visualize genes along the genome in Figure 4 on the forward strand (1′) or on the reverse strand (1).