TABLE 1.
Overview of dissociation constants measured by MST and 2fFCS for the interaction of TRIM B30.2 domains and CypA with the different HIV-1 capsid surrogates normalized to monomeric capsid equivalents
Capsid surrogate or negative control |
Kda |
|||
---|---|---|---|---|
rhTRIM5α | hsTRIM5α | hsTRIM20 | CypA | |
Capsid monomer | 1.6 ± 0.1 mMb | 1.1 ± 0.1 mMb | 2.2 ± 0.1 mMb | ND |
Capsid dimer | 0.61 ± 0.04 mMd | 0.49 ± 0.06 mMb | 1.8 ± 0.1 mMb | 26.5 ± 5 μMc |
Capsid trimer | 0.44 ± 0.04 mMc | 0.84 ± 0.09 mMc | ND | 17.8 ± 2 μMc |
Capsid hexamer | 0.60 ± 0.09 mMc | 0.54 ± 0.1 mMc | ND | 28.9 ± 3 μMc |
Lysozyme | 2.6 ± 0.3 mMc | ND | ND | ND |
The Kds for the interactions of TRIM B30.2 domains with the different HIV-1 capsid surrogates, as well as lysozyme, are indicated relative to the concentrations of the monomeric capsid equivalents. The Kds of the rhTRIM5α and hsTRIM5α B30.2 domains for the capsid trimer, which has the strongest binding affinity for the B30.2 domain of rhTRIM5α as well as the greatest increase in affinity compared to the Kd for the B30.2 domain of hsTRIM5α, are highlighted in bold. ND, not determined.
Kd determined by MST.
Kd determined by 2fFCS.
Average of Kds determined by MST and 2fFCS.