Table IX.
miRNA family | Conserved sites
|
Poorly conserved sites
|
6mer sites | Cumulative weighted context++ score | Total context++ scorea | Aggregate PCT | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Total | 8mer | 7mer-m8 | 7mer-A1 | Total | 8mer | 7mer-m8 | 7mer-A1 | |||||
miR-133a-3p.1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | −0.16 | −0.16 | <0.1 |
miR-3189-5p | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | −0.20 | −0.20 | N/A |
miR-7108-3p | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | −0.33 | −0.33 | N/A |
miR-7108-3p | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | −0.78 | −0.78 | N/A |
miR-4258 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | −0.32 | −0.32 | N/A |
miR-4281 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | −0.39 | −0.39 | N/A |
miR-7152-3p | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | −0.12 | −0.12 | N/A |
miR-4308 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | −0.16 | −0.16 | N/A |
miR-6791-5p | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | −0.17 | −0.17 | N/A |
miR-7113-3p | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | −0.52 | −0.52 | N/A |
miR-133a-3p.1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | −0.16 | −0.16 | <0.1 |
miR-3189-5p | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | −0.20 | −0.20 | N/A |
miR-7108-3p | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | −0.33 | −0.33 | N/A |
miR-7108-3p | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | −0.78 | −0.78 | N/A |
lens.elifesciences.org/05005/index.html. miR/miRNA, microRNA; N/A not applicable.