Table VIII.
miRNA family | Conserved sites
|
Poorly conserved sites
|
6mer sites | Cumulative weighted context++ score | Total context++ scorea | Aggregate PCT | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Total | 8mer | 7mer-m8 | 7mer-A1 | Total | 8mer | 7mer-m8 | 7mer-A1 | |||||
miR-145-5p | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | −0. 28 | −0.40 | 0.97 |
miR-130-3p/301-3p/454-3p | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | −0.18 | −0.37 | 0.94 |
miR-199-5p | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | −0.58 | −0.61 | 0.93 |
miR-141-3p/200a-3p | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | −0.52 | −0.52 | 0.90 |
miR-148-3p/152-3p | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −0.24 | −0.51 | 0.89 |
miR-29-3p | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | −0.16 | −0.32 | 0.88 |
miR-133a-3p.2/133b | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | −0.32 | −0.34 | 0.86 |
miR-21-5p/590-5p | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −0.09 | −0.19 | 0.79 |
miR-193-3p | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −0.24 | −0.49 | 0.77 |
miR-25-3p/32-5p/92-3p/363-3p/367-3p | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | −0.15 | −0.16 | 0.72 |
miR-142-3p.1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | −0.09 | −0.17 | 0.54 |
miR-153-3p | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | −0.27 | −0.28 | 0.32 |
miR-23-3p | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | −0.06 | −0.06 | 0.27 |
miR-203a-3p.1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | −0.16 | −0.16 | 0.24 |
miR-142-5p | 1 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 2 | −0.01 | −0.02 | 0.22 |
miR-489-3p | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | −0.01 | −0.02 | 0.15 |
lens.elifesciences.org/05005/index.html. miR/miRNA, microRNA.