Skip to main content
. Author manuscript; available in PMC: 2018 Feb 13.
Published in final edited form as: J Phys Chem B. 2014 Nov 25;118(49):14257–14266. doi: 10.1021/jp507754c

Table 1.

Experimental and fitted NMR relaxation data for HTD-2.

Residue Dataa 500 600 900 500 600 900 θ (deg) τi (ps) S2 RMSDb
1 Gly Exp 0.57 0.65 0.71 −0.26 0.03 0.57 111
IsoRigidc 0.46 0.47 0.46 −0.36 0.00 0.55 0.33
Ax Rigidd 0.46 0.48 0.47 −0.39 −0.04 0.52 111 0.33
Iso + Inte 0.63 0.65 0.63 −0.29 0.05 0.57 2 0.71 0.10
2 Ile Exp 0.57 0.60 0.61 −0.36 0.05 0.60 80
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.23
Ax Rigid 0.47 0.49 0.48 −0.47 −0.10 0.49 80 0.25
Iso + Int 0.59 0.60 0.59 −0.30 0.05 0.56 3 0.76 0.06
3 Cysf Exp −0.23 0.07 0.58 91
IsoRigid −0.36 0.00 0.55 0.11
Ax Rigid −0.49 −0.11 0.48 91 0.24
Iso + Int −0.30 0.05 0.56 25 0.93 0.05
4 Arg Exp 0.59 0.58 0.57 −0.47 0.04 0.63 82
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.22
Ax Rigid 0.47 0.49 0.48 −0.48 −0.10 0.49 82 0.22
Iso + Int 0.58 0.59 0.58 −0.32 0.02 0.52 18 0.77 0.13
5 Cys Exp 0.56 0.60 0.63 0.39 0.06 0.67 79
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.25
Ax Rigid 0.47 0.49 0.48 −0.46 0.09 0.49 79 0.27
Iso + Int 0.59 0.60 0.58 −0.28 0.06 0.57 1 0.77 0.11
6 Ile Exp 0.54 0.56 0.56 −0.38 0.13 0.65 67
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.20
Ax Rigid 0.46 0.47 0.47 −0.38 −0.02 0.53 67 0.21
Iso + Int 0.55 0.56 0.55 −0.28 0.06 0.58 0 0.82 0.10
7 Cys Exp 0.53 0.57 0.57 −0.35 0.12 0.61 86
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.19
Ax Rigid 0.48 0.49 0.48 −0.49 −0.11 0.48 86 0.25
Iso + Int 0.55 0.56 0.55 −0.28 0.06 0.58 0 0.82 0.08
8 Gly Exp 0.55 0.57 0.63 −0.30 0.09 0.62 87
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.23
Ax Rigid 0.48 0.49 0.48 −0.49 −0.11 0.48 87 0.29
Iso + Int 0.58 0.59 0.58 −0.28 0.06 0.57 1 0.78 0.08
9 Arg Exp 0.61 0.65 0.64 −0.31 0.08 0.56 85
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.30
Ax Rigid 0.48 0.49 0.48 −0.48 −0.11 0.48 85 0.33
Iso + Int 0.63 0.64 0.62 −0.29 0.06 0.57 2 0.72 0.04
10 Argg Exp 0.67 0.69 −0.29 −0.04 0.47 76
IsoRigid 0.46 0.47 −0.36 0.00 0.55 0.31
Ax Rigid 0.47 0.48 −0.45 −0.08 0.50 76 0.31
Iso + Int 0.67 0.68 −0.35 −0.02 0.49 18 0.66 0.05
11 Ile Exp 0.62 0.64 0.64 −0.28 −0.07 0.56 117
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.31
Ax Rigid 0.46 0.47 0.46 −0.34 0.00 0.54 117 0.31
Iso + Int 0.63 0.64 0.63 −0.32 0.02 0.53 12 0.71 0.07
12 Cysf Exp −0.21 0.09 0.51 89
IsoRigid −0.36 0.00 0.55 0.13
Ax Rigid −0.49 −0.11 0.48 89 0.25
Iso + Int −0.29 0.05 0.57 24 0.96 0.08
13 Arg Exp 0.58 0.57 0.60 −0.38 0.04 0.59 91
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.21
Ax Rigid 0.48 0.49 0.48 −0.49 −0.11 0.48 91 0.23
Iso + Int 0.57 0.59 0.57 −0.29 0.05 0.57 12 0.78 0.07
14 Cys Exp 0.56 0.59 0.59 −0.39 0.06 0.65 101
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.22
Ax Rigid 0.47 0.49 0.48 −0.46 −0.09 0.49 101 0.24
Iso + Int 0.59 0.60 0.58 −0.29 0.05 0.57 4 0.77 0.09
15 Ile Exp 0.54 0.55 0.58 −0.38 0.13 0.64 114
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.20
Ax Rigid 0.46 0.47 0.47 −0.37 −0.01 0.53 114 0.20
Iso + Int 0.55 0.56 0.55 −0.28 0.06 0.58 0 0.82 0.10
16 Cys Exp 0.52 0.58 0.59 −0.25 0.07 0.62 98
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.21
Ax Rigid 0.47 0.49 0.48 −0.47 −0.10 0.49 98 0.27
Iso + Int 0.56 0.57 0.56 −0.28 0.06 0.58 0 0.81 0.06
17 Gly Exp 0.61 0.58 0.61 −0.32 0.08 0.65 94
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.25
Ax Rigid 0.48 0.49 0.48 −0.49 −0.11 0.48 94 0.30
Iso + Int 0.59 0.61 0.59 −0.28 0.06 0.58 0 0.76 0.07
18 Arg Exp 0.60 0.68 0.71 −0.25 0.04 0.44 127
IsoRigid 0.46 0.47 0.46 −0.36 0.00 0.55 0.37
Ax Rigid 0.44 0.45 0.45 −0.22 0.10 0.58 127 0.40
Iso + Int 0.67 0.68 0.66 −0.32 0.02 0.53 10 0.67 0.11
RMSDh IsoRigid 0.47 0.55 0.63 0.23 0.23 0.22
Ax Rigid 0.46 0.53 0.58 0.44 0.47 0.35
Iso + Int 0.12 0.05 0.13 0.23 0.11 0.18
a

Abbreviations used: Exp, experimental data; Iso Rigid, isotropic rigid; Ax Rigid, axial rigid; Iso + Int, isotropic with internal motion.

b

RMSD is the root mean square deviation between the experimental and fitted (calc) T1 and NOE values. The NOE deviations were weighted by 50% because of their intrinsically higher errors compared to the T1 values.

RMSD=(T1exp-T1calc)2+[0.5(NOEexp-NOEcalc)2]
c

For isotropic rigid motion, the overall correlation time, τ0 = 1.04 ns.

d

For axial rigid motion, the overall correlation time, τ0 = 1.09 ns and the Dratio = 2.44.

e

For isotropic with internal motion, the overall correlation time, τ0 = 1.09 ns.

f

The 15N HSQC peaks for Cys3 and Cys12 were overlapped with those of Ile6 and Ile15 and a satisfactory exponential fit could not be obtained to determine T1.

g

Broadening of the Arg10 NH peak resulted in a poor exponential fit so Arg10 T1 was excluded from the analysis.

h

RMSD is the root-mean-square deviation between the experimental and fitted T1 and NOE values calculated over all the residues at each field strength.