Table 1.

Gene Ontology Terms Significantly Overrepresented in Positively Selected Genes Encoding Cytoplasmic Proteins in Sporisorium reilianum and Ustilago hordei

Gene Ontology ID	Gene Ontology Description	Category	P valuesa	Speciesb
GO: 0030532	Small nuclear ribonucleoprotein complex	CC	0.023	Srr
GO: 0045263	Proton-transporting ATP synthase complex, coupling factor F(o)	CC	0.038 and 0.036	Srr and Srz
GO: 0044425	Membrane part	CC	0.047	Srr
GO: 0031668	Cellular response to extracellular stimulus	BP	0.015 and 0.013	Srr and Srz
GO: 0051186	Cofactor metabolic process	BP	0.015	Srr
GO: 0042594	Response to starvation	BP	0.017 and 0.012	Srr and Srz
GO: 0009267	Cellular response to starvation	BP	0.020 and 0.014	Srr and Srz
GO: 0006790	Sulfur compound metabolic process	BP	0.022	Srr
GO: 0051301	Cell division	BP	0.023	Srr
GO: 0006777	Mo-molybdopterin cofactor biosynthetic process	BP	0.027	Srr
GO: 0009605	Response to external stimulus	BP	0.027 and 0.012	Srr and Srz
GO: 0043545	Molybdopterin cofactor metabolic process	BP	0.034	Srr
GO: 0043413	Macromolecule glycosylation	BP	0.036	Srr
GO: 0022402	Cell cycle process	BP	0.037	Srr
GO: 0051189	Prosthetic group metabolic process	BP	0.039	Srr
GO: 0006139	Nucleobase-containing compound metabolic process	BP	0.012	Srz
GO: 0016070	RNA metabolic process	BP	0.023	Srz
GO: 1901360	Organic cyclic compound metabolic process	BP	0.016	Srz
GO: 0006725	Cellular aromatic compound metabolic process	BP	0.024	Srz
GO: 0046483	Heterocycle metabolic process	BP	0.023	Srz
GO: 0035383	Thioester metabolic process	BP	0.041	Srr
GO: 1902589	Single-organism organelle organization	BP	0.048	Srr
GO: 0015074	DNA integration	BP	0.039	Uh
GO: 0006259	DNA metabolic process	BP	0.023	Uh
GO: 0010181	FMN binding	MF	0.047 and 0.022	Srr and Srz
GO: 0030515	snoRNA binding	MF	0.021	Srz
GO: 0016491	Oxidoreductase activity	MF	0.028	Srz
GO: 0016853	Isomerase activity	MF	0.029	Uh

CC, cellular component; BP, biological process; MF, molecular function.

^aCalculated by Fisher’s classic test with Parent–Child correction. Only entries with P value ≤ 0.05 are shown.

^bSpecies in which GO terms were found enriched. Srr, S. reilianum f. sp. reilianum; Srz, S. reilinaum f. sp. zeae; Uh, U. hordei.