REAGENT or RESOURCE	SOURCE	IDENTIFIER
Deposited Data
Cell line mutation data	(Barretina et al., 2012)	https://www.broadinstitute.org/ccle
Cell line DNA copy number data	(Barretina et al., 2012)	https://www.broadinstitute.org/ccle
Cell line microarray expression data	(Barretina et al., 2012)	https://www.broadinstitute.org/ccle
Project Achilles gene essentiality data	This paper	https://www.synapse.org/Broad_DREAM_Gene_Essentiality_Prediction_Challenge
Software and Algorithms
DEMETER algorithm
R version 3.3.3	(Tsherniak et al., 2017)	https://www.r-project.org/
GSEA software	(Subramanian et al., 2005)	http://software.broadinstitute.org/gsea/
lme4 R package	(Bates et al., 2015)	https://cran.r-project.org/package=lme4
glmnet R package	(Friedman et al., 2010)	https://cran.r-project.org/package=glmnet
survival R package	(Therneau and Grambsch, 2000)	https://cran.r-project.org/package=survival