Table 2.
ID | miRNA | Length of Precursor | ID transcript | % A and U | ΔG | AMFE | MFEI |
---|---|---|---|---|---|---|---|
Pmi-nov_1 | ATGGATATGCAAGCATGATA | 133 | comp66662_c8_seq2 | 66.92 | − 37.1 | 27.89 | 1.19 |
Pmi-nov_2 | CGGGGAAGAGGCTGAGCAAGGA | 103 | comp64725_c0_seq1 | 50.49 | − 57.5 | 55.83 | 0.89 |
Pmi-nov_3 | CTGTTAGCAGTAGTACAATTA | 133 | comp60703_c0_seq2 | 59.40 | − 55.1 | 41.43 | 0.98 |
Pmi-nov_4 | CTTGATTGAAATGGTTCTCGACGA | 83 | comp52499_c0_seq1 | 60.24 | − 24.6 | 29.64 | 1.34 |
Pmi-nov_5 | GGAGCGACCTTAGACCACATGA | 163 | comp6546_c0_seq1 | 51.53 | − 59.0 | 36.20 | 1.34 |
Pmi-nov_6 | GTGCTCTCTCTCATTGTCATA | 113 | comp51053_c0_seq1 | 55.75 | − 58.0 | 51.33 | 0.86 |
Pmi-nov_7 | TCCCACTCTCAACACCAA | 83 | comp62823_c0_seq1 | 44.58 | − 28.6 | 34.46 | 1.61 |
Pmi-nov_8 | AATGTATTTTTGGACGGAGGTAGTA | 82 | comp66383_c1_seq1 | 67.07 | − 13.8 | 16.83 | 1.96 |
Pmi-nov_9 | GTGCTCTCTCTCGTTGTCA | 143 | comp7042_c0_seq1 | 59.44 | − 61.6 | 43.07 | 0.94 |
Pmi-nov_10 | ACGGCTGCTCGATGACCA | 113 | comp51416_c0_seq1 | 48.67 | − 42.7 | 37.79 | 1.36 |
Pmi-nov_11 | AGGTCACAAATGGACGGTTGA | 113 | comp59558_c0_seq1 | 48.67 | − 57.9 | 51.24 | 1.00 |
From left, miRNA candidate, novel mature miRNA sequence, length of secondary structure, ID transcript that used for secondary structure prediction, percentage (%) of A and U base, MFE (ΔG), AMFE and MFEI value