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. 2018 Feb 15;8:3090. doi: 10.1038/s41598-018-21439-1

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Transcriptome changes associated to IXR1 deletion. (A) Volcano plot of transcriptome changes after IXR1 deletion, depicting individual probe pK value (−log₁₀) versus expression fold change (log₂). Dotted lines represent on the logarithmic corresponding scale the p-value selected threshold (p < 0.05) and the fold change cut off threshold (>1.40). Upregulated genes are red and downregulated genes are green. (B) Distribution of functional categories over-represented (green sector) in the up-DEGs in ixr1∆ versus W303 strain. (C) Distribution of functional categories over-represented (green sector) in the down-DEGs in ixr1∆ versus W303 strain.